Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241694g00008 ATGGAGGGAGTGAAGAGTATGATGATGATGATGGGATCCAGAGATTACATGGAAGCATTGGAAGATGAGCGCCGCAAGATTCAGGTCTTCTCCAAGGAGCTTCCTCTTTCCTTGGACCTCGTTACACAAGCCATTGAAGCATGTAAGCAGCAGTTGTCTGGGACAACCACGGAGTACAACATCAATGGACATCATCATCATAATAATCATTCCGAGTGTTCGGAGCAGACAACTTCAACTGATAATGGTCCTGTTTTGGAGGAGTTCATCCCAATTAAGAAGAGACCATCATCATCCTCTCATGATGAAGATGATGATGATTATGACGATGATGATGAGCAGCATTCCCATCACCATCGCCGTAAGATCTCAAAGGATGATAATAATGATGGTAATAAGAACAGTGATAAGAGGAAATCAGATTGGCTTAGATCCGTTCAGCTCTGGAATAATCCAGAACAACCCTCCTCACCACCTCAACAAGAGGAGGTGAATAATAATAAGAAAGGTGGTGCGGTGGAAGTGAAGAGAAGTGGAAGTGGTGGTGCTTTTCAGCCATTCCACAATAAGGACAAGGAAGAAAGACTAGGTGGTGGTGGTGGTGATCTAAAACCACCGTCTTCCTCCGCTCCTGCAGCCAGCTCCAACAGCAGCAAGAATAATAACAACAACAAGGAAGATAAAGATGGACAGAGGAAGCAGCGGCGTTGCTGGTCTCAGGAATTACACAAGCGATTCTTGCAAGCCCTTCAACAACTTGGTGGCCCTGATTCTGCCACACCAAAGCAAATCAGGGAGCTAATGAAAGTTGATGGCCTCACTAATGACGAAGTCAAAAGCCATTTACAGAAATACCGGTTACACACTAGAAGACCTAGTCCTCCCATGGTTCACAACAATGCCAATCCACAAACCACTCCCTTTGTCTTAGTAGGCAACATTTTTGTTCAACAGCCGGAATTCACTGCAGCCGTGGCCACTTCAGCACCAGATCTGGCCACGGCTGCAGCCCCGGCCCCGGCTGGAATATATGCCCCGGTAGCCACACATCCTCCTCCTCTGCTTCTTCCCGGTTCGACCAGAAGATCGCAGTTGAAGAAATCATCATCAAATCATCATTCACACTCAGAAGAAGATAGGACTAATAATCATCTTCAGAGTCATTCAAGTTCTCCAGCTTCATCATCATCCACACATACCACCACAACTACTTCCCCTGTCTATTGA 1227 0.4613 MEGVKSMMMMMGSRDYMEALEDERRKIQVFSKELPLSLDLVTQAIEACKQQLSGTTTEYNINGHHHHNNHSECSEQTTSTDNGPVLEEFIPIKKRPSSSSHDEDDDDYDDDDEQHSHHHRRKISKDDNNDGNKNSDKRKSDWLRSVQLWNNPEQPSSPPQQEEVNNNKKGGAVEVKRSGSGGAFQPFHNKDKEERLGGGGGDLKPPSSSAPAASSNSSKNNNNNKEDKDGQRKQRRCWSQELHKRFLQALQQLGGPDSATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPPMVHNNANPQTTPFVLVGNIFVQQPEFTAAVATSAPDLATAAAPAPAGIYAPVATHPPPLLLPGSTRRSQLKKSSSNHHSHSEEDRTNNHLQSHSSSPASSSSTHTTTTTSPVY 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241694g00008 408 MobiDBLite consensus disorder prediction 112 140 - -
Stsc241694g00008 408 Gene3D - 232 290 - -
Stsc241694g00008 408 MobiDBLite consensus disorder prediction 172 236 - -
Stsc241694g00008 408 MobiDBLite consensus disorder prediction 222 236 - -
Stsc241694g00008 408 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 14 377 IPR044787 GO:0003700|GO:0006355
Stsc241694g00008 408 MobiDBLite consensus disorder prediction 59 140 - -
Stsc241694g00008 408 FunFam Myb family transcription factor 232 290 - -
Stsc241694g00008 408 NCBIfam myb-like DNA-binding domain, SHAQKYF class 233 288 IPR006447 GO:0003677
Stsc241694g00008 408 Pfam Myb-like DNA-binding domain 235 286 IPR001005 -
Stsc241694g00008 408 MobiDBLite consensus disorder prediction 370 384 - -
Stsc241694g00008 408 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 230 290 IPR017930 -
Stsc241694g00008 408 SUPERFAMILY Homeodomain-like 231 291 IPR009057 -
Stsc241694g00008 408 MobiDBLite consensus disorder prediction 353 408 - -
Stsc241694g00008 408 MobiDBLite consensus disorder prediction 385 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241694g00008 Stsc-Chr241694 69153 71269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241694g00008 10 395 G2-like Transcription Factor Family AT1G68670 41.809 1.16e-75 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Stsc241694g00008 Myb_DNA-binding 4.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241694g00008 - - adu:107468029 483.411