Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241692g00035 ATGTTTAGCTACAGAATAATCCTTCTTACTCTCTTGTTTCTATGGCTTTCTACCAAAGGAGGCAATAGCACTAGCCCCTTGTTCCGCTACTGTTTCAACCATGAAAACTACACTGACCCGAGCCCTTACGCCACCAACTTGAACCAATTATTAAACCTATTATACACCAAAGTGCCCCCTCATGGTTTCGGACTTGCCTCCACTGGCCAAGCCCAAGACCAAGTCAACGGCCTAGCCTTGTGCAGAGGCGATGTCAACACCACAAACTGCACGTCATGCGTCAATGAAGCATCAAAGAAGCTTCTAGAACGCTGTCCGTACAAGAAAGGTGCAATCATATGGTACGATTACTGCCTCCTAAAGTACTCGAATGAAAACTTCTTCGGTGAAATTGATGAGAAGAACAAGTTCTACATGGTTAACGTGTACGATGTTGAAGGTGATGCTGGGAGTTTCAATGGTAAGGTGAGTGAGTTGTTGAGTTACTTGTCTTACAAGGCTTCTGAGAGTTCTGTGTTGTATGCGAGCGGTGAGTTGAAGCTTGATGAGGAGGAGGGGTCAAAAATGGTGTATGGGTTGGCTCAGTGTACAGGGGATCTTGGTGGGAGTAGTTGTAAGAAGTGTCTTGATGATGCTGTTGCTGAGATTCCAGATTGCTGTGATGGGAAACAAGGTGGTCGTGTTGTTGGTGGAAGTTGCTATGTTAGATATGAACTCTACCCTATTGTTGAATCATCCTAG 741 0.4507 MFSYRIILLTLLFLWLSTKGGNSTSPLFRYCFNHENYTDPSPYATNLNQLLNLLYTKVPPHGFGLASTGQAQDQVNGLALCRGDVNTTNCTSCVNEASKKLLERCPYKKGAIIWYDYCLLKYSNENFFGEIDEKNKFYMVNVYDVEGDAGSFNGKVSELLSYLSYKASESSVLYASGELKLDEEEGSKMVYGLAQCTGDLGGSSCKKCLDDAVAEIPDCCDGKQGGRVVGGSCYVRYELYPIVESS 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241692g00035 246 Gene3D - 137 241 IPR038408 -
Stsc241692g00035 246 Gene3D - 24 127 IPR038408 -
Stsc241692g00035 246 Pfam Salt stress response/antifungal 31 124 IPR002902 -
Stsc241692g00035 246 Pfam Salt stress response/antifungal 149 240 IPR002902 -
Stsc241692g00035 246 ProSiteProfiles Gnk2-homologous domain profile. 133 242 IPR002902 -
Stsc241692g00035 246 ProSiteProfiles Gnk2-homologous domain profile. 25 127 IPR002902 -
Stsc241692g00035 246 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 25 127 - -
Stsc241692g00035 246 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 7 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241692g00035 Stsc-Chr241692 185495 186533 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241692g00035 6 245 Pollen Coat Proteome AT4G20670 38.800 2.98e-48 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241692g00035 - - pvu:PHAVU_005G112700g 333.954