Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241692g00028 ATGGAGCCTTACAGCATAGACCCAATGTTTACAGGAATGAGCCTCCAATCACTCCTAAACCTAAACCCCTCACTCCTCTCCTTACTCACCGATCACCCTCCTCCACAACAACCACAACTACCAAACTACCTCCGTCATGATAATCAACCCTTTAACTTCATCCCCAAACGCCCCCGCCTCCATTATTACTCCTCCGCTTGTTCATCATCGACGCCGTCTTCACACCGCGCAAAGCCCCTTCCTCCGAAGAGCAACTTCGCTCGCCAGAGGAGGCAGAAGCTCAGCGAGAAGACTCGCTGCCTCCAGAAGTTGATGCCATGGGACAAGAAGATGGATCAGGCCACACTCTTCGAACAAGCCTACACTTACGTCAAGTTCTTGCAGGCTCAGGTCTCCGTTCTTCAATCCATGCCCTACCACACACCACCACCACCACCGCCATCCTCCTTCAACAATGGCGGCCGCGGTTGTGTGTTCGGTTTCGGCGACTTAGAGAGGCTGAGCAGGAACCAGTTGCTGCAGGTGCTTGTGAACTCTTCGGTGGCGCAGACGGTGATGTCGTCGCAGGGTCTGTGCGTGTTCTCCATGGAGCAGTTAGAGTTGCTGACGAAACTGTCGGAGCGGAGGCTTCTCCTTCAGAGCATGAACGCCAACAACATGAACATGGCGTCTGATTCCAAACCTTTCTTCAACTAA 696 0.533 MEPYSIDPMFTGMSLQSLLNLNPSLLSLLTDHPPPQQPQLPNYLRHDNQPFNFIPKRPRLHYYSSACSSSTPSSHRAKPLPPKSNFARQRRQKLSEKTRCLQKLMPWDKKMDQATLFEQAYTYVKFLQAQVSVLQSMPYHTPPPPPPSSFNNGGRGCVFGFGDLERLSRNQLLQVLVNSSVAQTVMSSQGLCVFSMEQLELLTKLSERRLLLQSMNANNMNMASDSKPFFN 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241692g00028 231 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 78 127 IPR011598 GO:0046983
Stsc241692g00028 231 SMART finulus 84 133 IPR011598 GO:0046983
Stsc241692g00028 231 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 85 142 IPR036638 GO:0046983
Stsc241692g00028 231 Gene3D - 82 139 IPR036638 GO:0046983
Stsc241692g00028 231 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 81 205 IPR045843 GO:0003700|GO:0006355
Stsc241692g00028 231 MobiDBLite consensus disorder prediction 65 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241692g00028 Stsc-Chr241692 162214 162909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241692g00028 90 206 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 44.068 4.38e-25 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241692g00028 - - aprc:113855910 186.808