Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stsc241692g00027 | ATGCCAAAGTCTGGATGTGAAGATCCTCGCTGGCCTCATAAAGACGACTTGTATTTTCCTTCTCAGAGCAGGAAACTTGATCTCCCTTTGTGGGCTTTTTGTGCTGATGAGCGGGTTGATTACTGTGCTGCGAGCAGATCAGCTCAAAGTAAGCCTGCCTTTGTCAGAGGAACAAAAGGAAATATTCTTTCAGTGGTTAGAATAAATGCATGTGTAGTCAAGGATCAGGGATCATTGATGTCTGAGTCACGCCACAAGTCGCGAGGGAAAGATAGATATCATTCAAGGTCTACACGCCCTCAATCTTCAACCAGTGATAGCAGGAGATCGTCAATTGAAGAGGATTCCCATTCAAAATCTGCTAGTGACCGAGGTTCTCGTCGGAGCATGGAATTTGTTAATGTCCCTAAAGATCATCTCTGTACTGTTAAGGATTTGCAGTTACATTTTGGTGACTGGTATTATCTTGATGGTTCTGGTCGTGAAAGAGGGCCATCATCATTTTTAGAACTGCAGCATTTAGTAGATCAAGGAATTATAAAAAAGCTTAGCAGCGTGTTTAGGAAAAGTGATAAACTATGGGTTCCTGTTACCTCTGCTTCAGAAGTTTCTGACGTCAGTCTCGAGAGCCACCAAGAAAGCAGTTCAACATCTGGAGTTCAATCAAAGCATATTCAAGATGTCTCTGTTGTTGAACCTTGTGCAAATCTAAGTTTGTTTAACAGAATACACCCTCAGTTTGTTGGTTACACTCGAGGGAAGCTGCATGAACTGGTAATGAAAACATATAAGAGTCGGGAATTTGCTGCAGCTATAAATGAGGTCTTAGATCCCTGGATCAATGCAAGACAACCAAAGAAAGAAACTGAGAAGCAAATTTATTGGAAATCAGATGGTGATGCACGTGCTACAAAAAGAGCCCGGATGCTGGTTGATGGTGAGGAAGACAGTGAGCTTGAAGATGATCCTACTATTGAGAAGGATGAAACCACGTTTGAGGATCTATGTGGTGATGCTACTTTCATTGGAGAAGCTATTGGTCTTACTGATTCTGAGATGGCAAGCTGGGGCTTATTGGATGGTCGGATGTTGGCAAGAATATTCCATTTTCTAAGATCTGATTTGAAGTCCCTTGTTTTTGCATCAATAACTTGCAAGCATTGGAGAACAGCTGTACGGTTTTACAAAGAAGTCTCAAGACATGTCAATATGTCATCAATGGGTCACTCCTGCACTGATTCCACGTTGTTGAACATTATGAATGCTTATGACAAAGACAAGATCAGTTCTTTGACTCTAATGGGTTGTAAGAATATTTCGGCTGACACCCTTGAGAAAATTCTTCTCTCTTTTCCTGGTTTGTCTACCATAGACATTAGAGGGTGCAGCCAGTTTGAAGAGCTGACTCCTAAATTTGTCCATGTGAAATGGATTAAGAGCCGTTCACACATTGGTAGATTTTTAGAGGAGCCTCATAAAATCAGAAGCCTTAAGCACATTACAGATCAAAGTTCATCTGTTTCAAAATCCAGCAGTTTAGGTATGGATGATTTTGGCCAGTTGAAGGATTATTTTGATAGTGTGGATAAGAGAGACTCAGCAAAGCAGTTGTTCCGTCGAAACTTATACAAGCGGTCAAAACTATACGATGCTAGAAGGTCCTCTTCCATTCTATCAAGGGATGCTCGTACAAGACGGTGGGCAATTAAGAAATCTGAAAGTGGTTATAAGAGGATGGAGGAATTCCTCGCTTCAAGACTGAGAGATATTATGAAGACAAACACCTGTGATTTTTTTGTGCCTAAGGTTGCAGAAATTGAGGCTAGAATGAAAAATGGATATTATATTGGCCGTGGCTTGAGCTCTGTCAAGGAAGACATCAGTAGAATGTGTCGCGATGCAATAAAGGCAAAGAATCGGGGTGATGCTAATGACATGAATCGTATGATCACATTGTTTATTCAGCTTGCAACACTGTTGGAAGAGAGCTCTATATCTGTGCATGACAGAGATGCACTATCCTCAAAGTATAAGAAAAATAGATTGGTAACTGACAGGAAGTATAGGAGTAATGGAACACATGGATTGGATAATATGGAATATACCTCTGATCGGGAAATTAGGAGGCGCTTATCTAAGTTGAATAAGAAATCTATGGATTCAGAGAGTGAAACATCTGATGATCTTGATCGGTCTTATGAAGATGGCAAGAGTGACAGTGATACTACAAGCTCTGAGGCCGAAAGTGATGACCAAGGACATTCAGAAAATCTATTTGGGGAGTCAAGGGGAGATGGACACTTCACACCAGAAGGAGATTTGAATTTTATAACCGATGATCGTGAGTGGGGTGCTCGAATGACAAAAGCCAGCCTTGTTCCCCCTGTTACTCGGAAATATGAAGTCATTGATCAATATGTCATTGTAGCTGATGAGGAAGATGTGCAAAGGAAGATGCGGGTTTCACTACCAGATGACTATGCAGAAAAGTTGAGTGCACAAAAGAGTGGTACAGAGGAGTCAGATATGGAACTTCCTGAAGTCAAGGATTATAAACCTAGAAAGCAGCTTGGGAATGAAGTTATTGAGCAAGAAGTGTATGGAATTGATCCTTATACGCATAATCTTTTGCTTGATTCGATGCCAGAGGAGTTAGATTGGTCCCTTCAGGACAAACATTTGTTCATAGAAGATGTGCTCCTTCGAACATTGAATAAGCAAGTCAGGAATTTTACCGGAAGTGGTAGCACTCCGATGAGCTATTCCCTGCAGCCTGTTATTGAAGAGATTAAGAGATGTGCAGAGGAGGGCTGTGATGCACGAACAGTTAAAATGTGTCAAGGTATTCTAAAGGCCATAGACAGTCGTCCAGATGACAAATATGTAGCTTATAGAAAGGGGCTTGGTGTTGTTTGCAACAAGGAAGAAGGCTTTTGCGAAGATGATTTTGTTGTGGAGTTTTTGGGAGAGGTTTATCCTGTGTGGAAGTGGTTTGAGAAACAAGATGGGATTAGATCTCTGCAGAAAAATAGTACAGATCCGGCACCTGAGTTCTATAACATCTACCTTGAGAGACCAAAGGGTGACGCTGATGGGTATGACTTAGTCGTTGTTGATGCCATGCATAAGGCTAATTATGCTAGTCGAATATGTCATTCTTGCCGACCAAATTGTGAAGCCAAAGTTACTGCTGTTGATGGTCATTATCAAATTGGGATTTATAGTGTTCGAAAAATTCAACCGGGTGAGGAGATCACTTTTGATTACAATTCTGTGACAGAGAGCAAGGAGGAATATGAAGCATCTGTTTGTTTATGCGGAAGTCAAGTATGCCGAGGCAGCTATCTCAATCTAACTGGTGAAGGGGCTTTCCAAAAGGTTTTGAAGGACTCGCATGGAATTCTTGATCGGCATTATTTGATGCTAGAAGCTTGTGAATTGAATTGTGTGTCTGAAGAGGACTATAATGACTTGGGAAGAGCTGGTTTAGGCAGCTGTTTGCTTGAAGGCCTGCCAGATTGGCTTGTTGCATATGCAGCTCGCCTGGTGAGGTTCATCAATTTTGAAAGAACCAAACTTCCCGAGGAAATTCTAAAGCATAACCTGGACGAGAAAAGAAAATATTTTTCTGATATATGCCTTGAAGTTGAAAGGAGCGATGCTGAGGTTCAGGCTGAGGGTGTTTACAACCAAAGGCTTCAGAATCTTGCCGTCACTCTTGACAAGGTAAGGTATGTTATGCGATGTATTTTTGGCGATCCCCGAAAAGCACCACCTCCTCTTGAGAAGCTCAGTCCTGAAGAAGCTGTTTCCTTTCTCTGGAAAGGAGAGGGTTCATTTGTTGAGGAGCTTCTTCAGTTGAGGGATGAGGTCCGAGATCTTCCTTGTACATACAAATGTCGGCATGATGCTGCTGCTGACTTAATCCATATTTACGCATATACCAAGTACTTTTTTAGAATACGGGCTTATCAAACCATTACTTCACCGCCTGTCTATATTAGTCCACTTGACTTAGGTCCCAAGTACGCTAACAAGTTGGGAGCAGGATTTCAGGAGTATCGGAAAATATATGGTGAAAATTATTGTTTAGGGCAGTTGATTTTTTGGCACAATCAGAGTAATGTGGATCCAGACCGTAGCCTTGGTAGAGCCAGCAGGGGTTGTCTGTCTTTACCAGACATCAGTTCCTTTTATGCCAAGGCTCTGAAGCCATCAAAGCATCGAGTTTATGGCCCAAGGACCGTAAGATCAATGCTTGCAAGAATGGAGAAGCAACCTCAGAGACCTTGGCCCAAGGACCAGATATGGTCGTTCAAAAGTTTTCCCAAATTCTTTGGTAGCCCAATGTTAGATGCTGTAATAAATAACATACCACTGGACAGGGAGATGGTTCATTGGTTGAAGCACAGACCTGCCATATACCAGGCCATGTGGGATCGTTAA | 4446 | 0.419 | MPKSGCEDPRWPHKDDLYFPSQSRKLDLPLWAFCADERVDYCAASRSAQSKPAFVRGTKGNILSVVRINACVVKDQGSLMSESRHKSRGKDRYHSRSTRPQSSTSDSRRSSIEEDSHSKSASDRGSRRSMEFVNVPKDHLCTVKDLQLHFGDWYYLDGSGRERGPSSFLELQHLVDQGIIKKLSSVFRKSDKLWVPVTSASEVSDVSLESHQESSSTSGVQSKHIQDVSVVEPCANLSLFNRIHPQFVGYTRGKLHELVMKTYKSREFAAAINEVLDPWINARQPKKETEKQIYWKSDGDARATKRARMLVDGEEDSELEDDPTIEKDETTFEDLCGDATFIGEAIGLTDSEMASWGLLDGRMLARIFHFLRSDLKSLVFASITCKHWRTAVRFYKEVSRHVNMSSMGHSCTDSTLLNIMNAYDKDKISSLTLMGCKNISADTLEKILLSFPGLSTIDIRGCSQFEELTPKFVHVKWIKSRSHIGRFLEEPHKIRSLKHITDQSSSVSKSSSLGMDDFGQLKDYFDSVDKRDSAKQLFRRNLYKRSKLYDARRSSSILSRDARTRRWAIKKSESGYKRMEEFLASRLRDIMKTNTCDFFVPKVAEIEARMKNGYYIGRGLSSVKEDISRMCRDAIKAKNRGDANDMNRMITLFIQLATLLEESSISVHDRDALSSKYKKNRLVTDRKYRSNGTHGLDNMEYTSDREIRRRLSKLNKKSMDSESETSDDLDRSYEDGKSDSDTTSSEAESDDQGHSENLFGESRGDGHFTPEGDLNFITDDREWGARMTKASLVPPVTRKYEVIDQYVIVADEEDVQRKMRVSLPDDYAEKLSAQKSGTEESDMELPEVKDYKPRKQLGNEVIEQEVYGIDPYTHNLLLDSMPEELDWSLQDKHLFIEDVLLRTLNKQVRNFTGSGSTPMSYSLQPVIEEIKRCAEEGCDARTVKMCQGILKAIDSRPDDKYVAYRKGLGVVCNKEEGFCEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNSTDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYSVRKIQPGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKDSHGILDRHYLMLEACELNCVSEEDYNDLGRAGLGSCLLEGLPDWLVAYAARLVRFINFERTKLPEEILKHNLDEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPRKAPPPLEKLSPEEAVSFLWKGEGSFVEELLQLRDEVRDLPCTYKCRHDAAADLIHIYAYTKYFFRIRAYQTITSPPVYISPLDLGPKYANKLGAGFQEYRKIYGENYCLGQLIFWHNQSNVDPDRSLGRASRGCLSLPDISSFYAKALKPSKHRVYGPRTVRSMLARMEKQPQRPWPKDQIWSFKSFPKFFGSPMLDAVINNIPLDREMVHWLKHRPAIYQAMWDR | 1481 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stsc241692g00027 | 1481 | Pfam | Protein SET DOMAIN GROUP 2 C-terminal | 1101 | 1286 | IPR045606 | - | |
| Stsc241692g00027 | 1481 | Pfam | Protein SET DOMAIN GROUP 2 C-terminal | 1284 | 1481 | IPR045606 | - | |
| Stsc241692g00027 | 1481 | Gene3D | Ribonuclease Inhibitor | 350 | 508 | IPR032675 | - | |
| Stsc241692g00027 | 1481 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 | 1284 | 1481 | - | - | |
| Stsc241692g00027 | 1481 | SUPERFAMILY | F-box domain | 362 | 412 | IPR036047 | GO:0005515 | |
| Stsc241692g00027 | 1481 | CDD | SET_SETD2-like | 964 | 1112 | - | - | |
| Stsc241692g00027 | 1481 | ProSiteProfiles | SET domain profile. | 951 | 1090 | IPR001214 | GO:0005515 | |
| Stsc241692g00027 | 1481 | SUPERFAMILY | SET domain | 965 | 1113 | IPR046341 | - | |
| Stsc241692g00027 | 1481 | MobiDBLite | consensus disorder prediction | 712 | 774 | - | - | |
| Stsc241692g00027 | 1481 | MobiDBLite | consensus disorder prediction | 712 | 761 | - | - |
Showing 1 to 10 of 15 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stsc241692g00027 | K22748 | - | gmx:100776205 | 2462.18 |
Showing 1 to 1 of 1 entries