Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241692g00009 ATGGAGTCTGGCCAAAGCATAACTTCAAAAAATTCATCAAGCTTTCTTGTTTCAAGTGGACAGAGATTTGTACTAGGCTTCTTCAGTAGTCCTGAATACAAAACAGAAACTTACCTGGGGATATGGTACAACAACGAAACAAATTACCCTGGAAAGCAAACGGTTGTATGGGTTGCCAACAGAGACAATCCTGTTGTGGGTTCCAATAATGTTGGAGTCTTTCGTATTGCAGATGATGGAAATCTTGTAGTAGAAGATGCATCAGGTAAACGATTGTATTGGTCCAAATCAAGAGAAGAGGCCACGAACAGAAGAAGGATAGTGAAGCTAATGGATTCTGGGAATCTAGTATTGTTCGATGAAGAAGATGGAGATTATTACATATGGCAAAGCTTCCAACACCCCACGGACACGTTTCTTCCTGGAATGAAGATGGACATGGATGGCATGGAATTAAGCAGTGGGAGCTTCATCTTCAAGATGTCTCCAACTCCAAATAATCGGAAGAACCGTTATGTCATCCTGAACGATCAAGAACTTTACTGGGAAAATGATGGACTCAATTCAGATGCGTTGAGCCCTGACACACTCCAATATTTGGCTAACTGGACAGCCATGAACATCTCTACCACTATCAGGAACGCTGCGAATCATACGATGAATATTTCCAGCACAGGGACCTGGGAAGCACTGAGAGAAAAAGAAAGGGAAACGTTGTATAATGAACACAAGGACACAAGGATTGTGATGGATCATTCTTCAGGGGAGATACAGTATTTCAAGTGGGAAGGAGACGGTGTAGGATGGACAGTTCTATGGAAGCAGCCATCAGACAAGTGCCATATATATAATATCTGCGGAAACTTTAGCAGCTGCGACATTGCAGATGATTCCAGGATCTGCAAATGTTTACCAGGGTTTAAGGAGAATAATCAGAGCCATGATGAGGGTGGGTCCAGATTCCAAGGATGTAACAGAAATACACCATTGAAGTATGACAGCAGAGACATGTTGATGATGTTCGTTAACTTGCCCATGGTAAGAGTGACCGCATCAGACCTCAAATCCTTTGCAGAAACCGAAGATGAATGCCGGGTTTCGTGCCTTGACATGTATCATCCCCGGTGCCAGGCTTATTCCTATAATAAATCTGCTTCAAGTTATGATCGTAGTCCTCTTTCATGTGGAATTTGGACACGGGATTTAACTACTCTTGAAGTAGTCCAAGATGGTGATGATGCTGCTTCTTATCTTTCTGTTCTAGTCAACCGTTCAGATATAGCACCAATGGCGAAATCATGTCAGCCTTGTGGTATATACGTGATTCCTTATCCCCTAAGCACTGGACCAAGCTGTGGAGATCCTACCTACAACAACTTCATCTGCAACAACTCAACTGGGAAGCTTAACTTCACTATCCCCGGTGGAGAATCCTACCGAGTTACTTGGGTAGATCAAAATGCCAGAAAGTTTTATATCCAAACCAGTGATTCTTATCGCTCTGACTCCAACAATCAAAATAAAGGCCCTGGTCATCCCTTTAATGTGACAAACTGGTCCTACAAAGATGATGAAATTGAGGTCGGTTGGGATCCAGCACCAGAACCGCCCTGTAATCACCTTACAGACTGCAATGATTGGCCCCATTCAACATGCCGAGAAAAACTTCATCAAGGGGAAAAGAGGAGAGGAATCAAGAAACCACAAATTGCTATTGATTCTCTCTGTAACTCTCACAGTCATGATTTTGCTAGCATGTCTAATGATAGGGCGAACATTCTAATACAAGAGAGCTTATATGATAGTCAAAGACAAGTCAAAGGTTTGATTGGCTTGGGAGGTTTAGAAGACAGACACAGTGAAAGCATTGAAGTGCCTTTCTATACTTACAGAAGCATTGTAGCAGCTACTGATAATTTCTCTGAGTCAAACAAGCTTGGAAGAGGAGGTTTTGGACCAGTCTACAAGGGAAGGTTTCCCGGAGGCCAAGATATTGCTGTAAAAAGGCTTTCAAATGTCTCCACACAAGGGCTAGAGGAATTCAAAAATGAGATTGTTTTAATTGCGAAACTTCAACATCGAAACCTTGTTAGACTCAGAGGCTATTGCATAAAGGGAGATGAGAAGATTTTACTTTATGAATACATGCCGAACAAGAGCTTGGACTCTTTCATATTTGACCGTTCAAGAACTTTACTTCTTGACTGGCCAATGCGGTTTGACATAATCTTAGGCATTGCACGCGGATTGCTCTATCTTCATCAAGACTCTAGACTAAGAATAATTCATAGAGACCTAAAAACCAGCAACATTCTTCTAGATGAGGACATGACACCCAAGATTTCAGACTTTGGTCTTGCAAAAATATTTGGAGGAAAAGAGATTGAAGCAAGCACACAGAGAGTTGTGGGAACTTACGGATATATGGCACCAGAATATGCTTTGGATGGATTTTTTTCAATCAAATCCGATGTTTTCAGCTTTGGTGTAGTCCTATTAGAGATTCTTAGTGGAAAAAAGAACACCGGATTCTATCAATTCAAACAAACTGCTACCCTTTTGGGATATGCATGGGGATTGTGGACAGAGAATAGGCTTATGGATTTAATGGATGCATCTTTCAGTGGAACTTGCAACGAGAATCAATTTAACAAGTGTGCACATATTGCACTCTTGTGTGTGCAAGATGAACCAGGTGATCGACCAACCATGTCAAGTGTTTTGACAATGCTTGATAGTGAGATTGCAACCATCCCTATTCCTAAACAACCAACATTTTATGCAATTAGAAGGACTACGAGCACTACTGCTTCTTCTTCAAGCAAAACAGAGACAACTATGCAAATTGAGAGCAGTTATCAAGAAGGTAGATAG 2874 0.4148 MESGQSITSKNSSSFLVSSGQRFVLGFFSSPEYKTETYLGIWYNNETNYPGKQTVVWVANRDNPVVGSNNVGVFRIADDGNLVVEDASGKRLYWSKSREEATNRRRIVKLMDSGNLVLFDEEDGDYYIWQSFQHPTDTFLPGMKMDMDGMELSSGSFIFKMSPTPNNRKNRYVILNDQELYWENDGLNSDALSPDTLQYLANWTAMNISTTIRNAANHTMNISSTGTWEALREKERETLYNEHKDTRIVMDHSSGEIQYFKWEGDGVGWTVLWKQPSDKCHIYNICGNFSSCDIADDSRICKCLPGFKENNQSHDEGGSRFQGCNRNTPLKYDSRDMLMMFVNLPMVRVTASDLKSFAETEDECRVSCLDMYHPRCQAYSYNKSASSYDRSPLSCGIWTRDLTTLEVVQDGDDAASYLSVLVNRSDIAPMAKSCQPCGIYVIPYPLSTGPSCGDPTYNNFICNNSTGKLNFTIPGGESYRVTWVDQNARKFYIQTSDSYRSDSNNQNKGPGHPFNVTNWSYKDDEIEVGWDPAPEPPCNHLTDCNDWPHSTCREKLHQGEKRRGIKKPQIAIDSLCNSHSHDFASMSNDRANILIQESLYDSQRQVKGLIGLGGLEDRHSESIEVPFYTYRSIVAATDNFSESNKLGRGGFGPVYKGRFPGGQDIAVKRLSNVSTQGLEEFKNEIVLIAKLQHRNLVRLRGYCIKGDEKILLYEYMPNKSLDSFIFDRSRTLLLDWPMRFDIILGIARGLLYLHQDSRLRIIHRDLKTSNILLDEDMTPKISDFGLAKIFGGKEIEASTQRVVGTYGYMAPEYALDGFFSIKSDVFSFGVVLLEILSGKKNTGFYQFKQTATLLGYAWGLWTENRLMDLMDASFSGTCNENQFNKCAHIALLCVQDEPGDRPTMSSVLTMLDSEIATIPIPKQPTFYAIRRTTSTTASSSSKTETTMQIESSYQEGR 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241692g00009 957 Gene3D Phosphorylase Kinase; domain 1 615 715 - -
Stsc241692g00009 957 Gene3D Transferase(Phosphotransferase) domain 1 716 918 - -
Stsc241692g00009 957 ProSiteProfiles PAN/Apple domain profile. 324 422 IPR003609 -
Stsc241692g00009 957 Pfam Protein tyrosine and serine/threonine kinase 643 910 IPR001245 GO:0004672|GO:0006468
Stsc241692g00009 957 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 716 919 - -
Stsc241692g00009 957 Pfam D-mannose binding lectin 54 148 IPR001480 -
Stsc241692g00009 957 Pfam S-locus glycoprotein domain 240 310 IPR000858 GO:0048544
Stsc241692g00009 957 SUPERFAMILY alpha-D-mannose-specific plant lectins 55 151 IPR036426 -
Stsc241692g00009 957 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 95 938 - -
Stsc241692g00009 957 SUPERFAMILY Protein kinase-like (PK-like) 622 947 IPR011009 -
Stsc241692g00009 957 SMART serkin_6 640 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241692g00009 957 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 610 715 - -
Stsc241692g00009 957 MobiDBLite consensus disorder prediction 937 957 - -
Stsc241692g00009 957 CDD B_lectin 11 135 IPR001480 -
Stsc241692g00009 957 SMART blect_4 8 135 IPR001480 -
Stsc241692g00009 957 Gene3D - 1 133 IPR036426 -
Stsc241692g00009 957 ProSiteProfiles Bulb-type lectin domain profile. 1 131 IPR001480 -
Stsc241692g00009 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 761 773 IPR008271 GO:0004672|GO:0006468
Stsc241692g00009 957 CDD STKc_IRAK 646 912 - -
Stsc241692g00009 957 ProSiteProfiles Protein kinase domain profile. 640 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241692g00009 Stsc-Chr241692 50384 54113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241692g00009 616 926 Receptor kinase-like Gene Family AT4G23230 57.235 2.38e-121 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc241692g00009 PK_Tyr_Ser-Thr 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241692g00009 - - aip:107612578 1491.09