Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241691g00017 ATGTGGAATCCCCTGTCATGGGTCATGAAAGCTGCAGCTATCATGGCTATTGCACTTGCAAATGGTAATGGTAAGCCTCCGGATTGGCAAGATTTCATTGGTATCGTTTGTTTGTTGTTTATCAACTCCACCATCAGTTTCATTGAAGAAAACAATGCTGGAAATGTTGCTGCCGCTCTTATGGCTGGTCTTGCTCCCAAGACTAAGTGCAATGACTACCCGGCCACTGACAATGTTCACGACGGACCACGAGGCCCCAACAAAAAAAAATACCCATTCCGGCCCCTGTCTTTTATGGACGTTAGACGAAAAACCTCCTCCGTCAGTTGTGCTAGTGTTGGCTTGACGAAGCAAGCAAACGTGGCACAGATAAGGAGTTGCACCCTTGGAGAATACACTGTCGGCGGCGATAGCAGGACGTGCACTGCTTCCAGCGACAGTGTGGGTCAGCCCAGGAAGAAGAAGTTTTCTTCTCCAAGATGTGACTGTGGGAGCTATGCTATCATATTCCAGTCCTGCACAAAGATTAATCCGGACAGATTTTTTCTTGGTTGCCCTAACTACAATACAAGCCGATCTCATTGCAACTATTTCCATTGGCTGGATATGATGGTGGAAGAAAATATTGAGGAGACGAGCTCTGGTAGGAATGCGATTTTCATGGCGAGAAGGTTGAGGGAGCTTGAGCAAAGGGTTATCGAGCTGGAGTTTGGGGGGAAAGATGGTGCTAGAGGTTATCAGGGTAATAAGTGTATATGTTTGACCATGATGGAATTGATTAGCATTCTGTTTGTGTTAGCAATCAAGGGCATGTTCTAG 819 0.4628 MWNPLSWVMKAAAIMAIALANGNGKPPDWQDFIGIVCLLFINSTISFIEENNAGNVAAALMAGLAPKTKCNDYPATDNVHDGPRGPNKKKYPFRPLSFMDVRRKTSSVSCASVGLTKQANVAQIRSCTLGEYTVGGDSRTCTASSDSVGQPRKKKFSSPRCDCGSYAIIFQSCTKINPDRFFLGCPNYNTSRSHCNYFHWLDMMVEENIEETSSGRNAIFMARRLRELEQRVIELEFGGKDGARGYQGNKCICLTMMELISILFVLAIKGMF 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241691g00017 272 PANTHER CALCIUM-TRANSPORTING ATPASE 1 70 - -
Stsc241691g00017 272 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 66 IPR023298 -
Stsc241691g00017 272 Gene3D - 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241691g00017 Stsc-Chr241691 166909 168177 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241691g00017 1 70 Primary Pumps ATPases AT2G07560 85.714 1.44e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241691g00017 K01535 - gmx:100816905 132.88