Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241690g00026 ATGGCGGCTTCCTTGTACAGCTCCACTTCCTGCATATCCCTTCCAAACCCTACCCAACACCCACGCTCTTTCTCTCACCACCTCTCTTTCAATTCCCACCCACACCTAAACCTCACAAATCCTCTCTCCTTCGTGCTCAATAACGGAGAGAGACGATTAACAATCTCGACGAAATGCAGTGTGCTCAACGACGAAGGACTGAATGGGAGTGCGGAAGAGGAGAGCTACAACCATGTTGAGGACAAGCAATTCGTGCGGTGGTTCCGGGAGGCATGGCCTTACTTGTGGGCACACCGCGGTGGCACATTTGTTGTCATTATTTCCGGCGAAATCGTTGCTAGTCCTTACTTGGATCCCATTCTCAAGGACATAGCTTTTCTTCATCACCTTGGGATCCGGTTTGTGCTTGTACCAGGGACACATGTTCAAATTGATCAGCTTTTGTATGAGAGAGGGGGCGAGCCTAAGTACTATAGTAGGTATAGAATAACTGATGATGAATCTCTAGCAGCTGCAATGGAAGCGGCTGGAAGAATAAGGTTGATGTTAGAAGCAAAACTTTCACCTGGACCCTCCATATGCAACATCCGCAGGCATGGTGACAATAGTCGTTGGCATGAAGTTGGTGTCAGTGTTGCCAGTGGTAACTTCCTTGCAGCCAAGAGAAGAGGGGTTGTCAATGGAATTGATTTTGGGGCAACCGGGGAAGTTAAAAAAGTAGATGCATCTCGCATGCGTGAGAGGCTTGATGGTGGTTGTGTAGTTATTTTAAGCAACTTGGGCTACTCCAGCTCTGGAGAAGTACTAAATTGCAACACCTATGAAGTTGCAACAGCTTGTGCCTTGGCTATTGGAGCAGACAAGCTAATATGCATTATAGATGGTCCAATACTCGATGAGAGTGGACGCCTAATTCGTTACTTACCTCTTCAAGAAGCAGATATGTTAATTCGTAAACGGGCTGAACAAAGTGAAATAGCTGCTAACTATGTGAAAGCTGTTGATGTTGAAGGTTTCAACTCTTTTGATCATACCAATTTTAATGGGACAGCCCAATCTTCATCCAATGGCAAACCTTTTACTGGTTGGAATGCAACCTTTCATAATGGTGTTGGTTTTGACAATGGAAACGGTCTAGGGTTTGGGGAGCAAGGTTTTGCTATCGGAGGTCAAGAACGACTCAGTCGAATGAATGGTTACCTGTCAGAATTGGCTGCTGCAGCTTTTGTTTGTCGAGGTGGTGTTCAAAGAGTTCACTTGTTGGATGGCACTATTGGTGGAGTTTTGTTGTTGGAATTGTTTAAAAGAGATGGGATGGGAACAATGGTTGCTAGTGACCTATATGAAGGCACTCGGATGGCACAGATAACGGATCTTGCTGGAATAAAGCAAATCATTCAGCCTTTGGAGGCATCTGGCATATTGGTTAAGCGGACTGATGAAGAGTTATTAAAAGCACTGGATTCCTTCGTTGTTGTTGAAAGAGAAGGTCAAATAATAGCTTGTGCTGCACTTTTTCCTTACTTTGAGGAGAAGTGTGGGGAGGTTGCAGCCATTGCAGTATCTCCTGATTGTCGAGGCCAAGGACAAGGAGACAAAGTGCTTGATTATATCGAGAAGAAAGCATCATTTCTTGGATTGAATAAGCTTTTCCTACTTACTACTCGGACGGCAGATTGGTTTGTGAGGCGTGGATTTTCAGAATGTTCAATCGATGCTATTCCTGAAAAGCGAAGGAAAATGATCAATCTTTCCCGCAATTCTAAGTATTATATGAAGAAGCTCCTACCAAATACAAGTGGAATAACTGTGGGAAAAATTACTTCAAATTAG 1833 0.4424 MAASLYSSTSCISLPNPTQHPRSFSHHLSFNSHPHLNLTNPLSFVLNNGERRLTISTKCSVLNDEGLNGSAEEESYNHVEDKQFVRWFREAWPYLWAHRGGTFVVIISGEIVASPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDQLLYERGGEPKYYSRYRITDDESLAAAMEAAGRIRLMLEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGIDFGATGEVKKVDASRMRERLDGGCVVILSNLGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILDESGRLIRYLPLQEADMLIRKRAEQSEIAANYVKAVDVEGFNSFDHTNFNGTAQSSSNGKPFTGWNATFHNGVGFDNGNGLGFGEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRMAQITDLAGIKQIIQPLEASGILVKRTDEELLKALDSFVVVEREGQIIACAALFPYFEEKCGEVAAIAVSPDCRGQGQGDKVLDYIEKKASFLGLNKLFLLTTRTADWFVRRGFSECSIDAIPEKRRKMINLSRNSKYYMKKLLPNTSGITVGKITSN 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241690g00026 610 PANTHER AMINO-ACID ACETYLTRANSFERASE 58 603 IPR010167 GO:0004042|GO:0005737|GO:0006526
Stsc241690g00026 610 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 449 597 IPR000182 GO:0016747
Stsc241690g00026 610 Pfam Acetyltransferase (GNAT) family 488 554 IPR000182 GO:0016747
Stsc241690g00026 610 Hamap Amino-acid acetyltransferase [argA]. 83 595 IPR010167 GO:0004042|GO:0005737|GO:0006526
Stsc241690g00026 610 NCBIfam amino-acid N-acetyltransferase 404 595 IPR010167 GO:0004042|GO:0005737|GO:0006526
Stsc241690g00026 610 CDD AAK_NAGS-ABP 83 443 IPR033719 -
Stsc241690g00026 610 CDD NAT_SF 490 552 - -
Stsc241690g00026 610 Pfam Amino acid kinase family 103 315 IPR001048 -
Stsc241690g00026 610 Gene3D - 449 595 - -
Stsc241690g00026 610 SUPERFAMILY Carbamate kinase-like 397 445 IPR036393 -
Stsc241690g00026 610 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 452 598 IPR016181 -
Stsc241690g00026 610 SUPERFAMILY Carbamate kinase-like 82 318 IPR036393 -
Stsc241690g00026 610 Gene3D - 82 448 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241690g00026 Stsc-Chr241690 168481 173309 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc241690g00026 AA_kinase 4.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241690g00026 K14682 - gmx:100800925 913.679