Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241690g00019 ATGGATACATTGTTTAGAGTAGTGAGTTTTCAACAATACCAACAACAGCAACAAGTTGAATTAGATCAGTCCCTCAACTCCACCACCACCACAACCACTACTTCCAGCAGCTCTAGATCCTCCCGACACAATTATCACCACTACCACCAACAGCAACAAGACGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACCTCTCCTCGTCTTCTTCCAAGCACCACTACTATCCCTATCACCCCCACTCTTCCACTACTACCACTACCCCCACCACCATCCTCACCCCCACCCCGACCACCACCACCGACTTCTCCTACTCTCTCTCCTCCCCCACCCGCGACTTCAACTTCGATTTCTCCTCAAACGCCAAGTGGTCTCACGACCTCCTTCTCCACACCGCGCGTGCTCTTGCCGACAAGAACACCGCGCGTCTTCAGCAGCTCATGTGGATGCTCAACGAGCTCAGCTCTCCTTATGGCGATACCGAACAGAAGCTAGCCGCCTACTTCCTTCAAGCGCTCTTCAGCCGCATGACTCATGCCGGTGATCGAACCTTCCGAACGTTAACCACCGCCTCTGATAAGACTTGCTCCTTCGAATCAACCAGAAAGACGGTGCTCAAGTTCCAAGAGGTGTCCCCATGGACGACCTTCGGACACGTGGCAGCCAATGGCGCAATCTTGGAGGCTTTGGAAGGTGAAGCAAAGTTGCACATAGTTGATATTAGCAACACGTACTGCACTCAATGGCCAACGCTGTTTGAAGCCTTGGCGACTCGCTCCGACGACACGCCGCACCTCAGGATCACCACCATCGTCGTCACAACTGCTCACGGCGGATCTGTCCCGGCGGCGCAGAGGGTTATGAAGGAGATAGGTGCCAGGATGGAGAAGTTCGCCAGGCTCATGGGAGTTCCGTTCAAGTTCAACGTCGTTCACCATTCCGTGCTCGGATCACGGCGGAATGATGCTGTGGTGGAAGGAGCAGGCGGTGGTGTGGGCCAGTGCATGGAGGCCCAGCTTCACGTAGTGATCATGACTCATTCATCGCACGTGCTCTCTTCTTTTAGCACGTGCCTTCAGCTTTGA 1089 0.5363 MDTLFRVVSFQQYQQQQQVELDQSLNSTTTTTTTSSSSRSSRHNYHHYHQQQQDEECFNFFMDEEDLSSSSSKHHYYPYHPHSSTTTTTPTTILTPTPTTTTDFSYSLSSPTRDFNFDFSSNAKWSHDLLLHTARALADKNTARLQQLMWMLNELSSPYGDTEQKLAAYFLQALFSRMTHAGDRTFRTLTTASDKTCSFESTRKTVLKFQEVSPWTTFGHVAANGAILEALEGEAKLHIVDISNTYCTQWPTLFEALATRSDDTPHLRITTIVVTTAHGGSVPAAQRVMKEIGARMEKFARLMGVPFKFNVVHHSVLGSRRNDAVVEGAGGGVGQCMEAQLHVVIMTHSSHVLSSFSTCLQL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241690g00019 362 ProSiteProfiles GRAS family profile. 117 362 IPR005202 -
Stsc241690g00019 362 Pfam GRAS domain family 128 316 IPR005202 -
Stsc241690g00019 362 MobiDBLite consensus disorder prediction 19 49 - -
Stsc241690g00019 362 MobiDBLite consensus disorder prediction 19 41 - -
Stsc241690g00019 362 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 83 319 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241690g00019 Stsc-Chr241690 140858 142246 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241690g00019 1 314 GRAS Transcription Factor Family AT4G37650 59.763 2.30e-116 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc241690g00019 GRAS 1.1e-54 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241690g00019 - - qsa:O6P43_033912 380.178