Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241690g00011 ATGGCTAACATGGACCAAAATTGTTGTAAATCTCTCCAAGATGGCAACAAATTTGGTCCGGCATTGCCACCGCCACCGCCGCCTCCTCTGCCCCGTCTGGCGGCAACCAGGACAGGCTGTTGTCCTTGCAAGCGCCAGGTGGAGCGAAGCTATGTATCTCCAGCAGCAATAGAATTGTGGGATCGTCTTTTTGATACAGGGTATAAAGCAGATGTTAGGATTAACACTGGTAACGGTGGCATTGTTTACGCTCATTATAACATTATTTCAGTAGCATCCCCTGTATTAAGAGGCTTGCTGAAGCAAGGAAGTGTTCGTCGGAGGTGGCGAACAATCACAATCTCAGGGGTCCCGCATGATGCTGTTCGGGTTTTCTTTCGATATTTGTACACTTCGTGTTATGAAAAGGAAGATATGGAGGAATTTGTACTACATTTGTTAGTGCTGTCACATGTATTCATGGTCCCTCAATTGAAGAGGGAATGTGAGGAGAAGCTAGAATCGAGTTCTCTCACGCTAGACAATGTAGTCGACGTATTTCAGATTTCGTTGCTTTGTGATGCTCCACGGCTTAGCCTCATCTGTCACCGCATGATACTTAGCAACTTCAAAGCAGTTTCAGAGTCCGAAGGATGGAAAGCGATGAAGGAGAGCCACCCGGCTTTAGAAAAGGAAATTCTCGAGTCTATGATCGAAGAAGAAAATAATAAAAAAGAGAGGATCAGAAAGATCAATGAGAGGAAGATTTACATGCAACTGTATGAGGCGATGGAGGCTCTTGTTCACATATGCAAAGATGGTTGCCGAACCATTGGCCCTTGTGACAAAGACTTCAAAGCGAATCAGCCATGTAAATATTCGGCGTGTAAGGGGNNNNNNNNNNTGTGCGACATTTTGCTGCATGCAAACTGA 912 0.4485 MANMDQNCCKSLQDGNKFGPALPPPPPPPLPRLAATRTGCCPCKRQVERSYVSPAAIELWDRLFDTGYKADVRINTGNGGIVYAHYNIISVASPVLRGLLKQGSVRRRWRTITISGVPHDAVRVFFRYLYTSCYEKEDMEEFVLHLLVLSHVFMVPQLKRECEEKLESSSLTLDNVVDVFQISLLCDAPRLSLICHRMILSNFKAVSESEGWKAMKESHPALEKEILESMIEEENNKKERIRKINERKIYMQLYEAMEALVHICKDGCRTIGPCDKDFKANQPCKYSACKGXXXXCDILLHAN 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241690g00011 303 SUPERFAMILY TAZ domain 242 292 IPR035898 -
Stsc241690g00011 303 MobiDBLite consensus disorder prediction 19 33 - -
Stsc241690g00011 303 FunFam BTB/POZ and TAZ domain-containing protein 2 172 242 - -
Stsc241690g00011 303 ProSiteProfiles BTB domain profile. 70 138 IPR000210 GO:0005515
Stsc241690g00011 303 SMART BTB_4 70 170 IPR000210 GO:0005515
Stsc241690g00011 303 Pfam BTB/POZ domain 63 169 IPR000210 GO:0005515
Stsc241690g00011 303 MobiDBLite consensus disorder prediction 11 33 - -
Stsc241690g00011 303 SUPERFAMILY POZ domain 52 168 IPR011333 -
Stsc241690g00011 303 Gene3D Potassium Channel Kv1.1; Chain A 44 170 IPR011333 -
Stsc241690g00011 303 Gene3D - 171 248 - -
Stsc241690g00011 303 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 40 291 IPR044513 -
Stsc241690g00011 303 Coils Coil 224 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241690g00011 Stsc-Chr241690 93710 96089 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Stsc241690g00011 BTB 1e-11 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241690g00011 - - gmx:100807461 381.719