Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241690g00010 ATGAAATTCAGTTTCCACCTACATAACTCTCACTCTCTCTTCTTTATTATTATCATCATCATAATCTCTCTTTTGTCCATATTATCCATCGCTAAACCCCTCAATGAATCCCGCATTACGAGAAGGATCCTACACCAGCCACTTTTCCCCGCCGCTTCAGTACCGCCACCAGCACCGGCTCAATTGCCACCGCCGGTGGAAACTCCGCCCTCTCCGGACACCAACATTCCCTTCTTCCACGAGTATCCAGCTGGACCACCACCGGATCAGCCGCAATCACCGCCATCAACAACTGCCAACAGCACCATCGCGAACCCGACGGCCACGCAACCGACCAAGGGGACAAAGAAGGTGGCAATTGCCATCTCCGTCGGAATCGTGACGCTTGGGATGCTCTCGGCGCTGGCGTTCTTCCTGTATAAGCACAGAGCCAAGCACCCTGTGGAGACACAGAAGCTTGTCGGTGGAAACTCGCAGAGGAATATCGATGATTCGAGAGCGCAACCGCCATCGAGCTTCCTCTACATTGGAACCGTGGAGCCCACGCGCACCTCCGCGAGTGATCCAATCCGTTCGCCGTATCACAAACTCAATTCCGTTAAGCGCTCTGATCGGTACCGTCCAAGCCCCGAGCTGCAGCCATTGCCGCCTCTCACTAAGCCTACTCCAGATGGGAATTTCCCACCGGCGGTGTCGCCGTCTTCGTCTTCCGACGAGGAGAGCCACGACACGGTGTTTCACTCGCCGCAGAACTCGTCGGTTAGAGATGACGACGGGTACTTCACGCCGGTTTCGCGACAGAGTTATCTGTCCAACGGTAGCCCCGCGGCGGTGGCGCCGGTGAGGAGGGAAGCCAATTCTTCTACGCCGACACAGGTTCCGTTCTCGAAGAGGACTTCACCGAAGTCTCGATTCTCTGCTCCGTCGCCGGATGTAAGACACGTCATCATACCGCCTATGAAGAAGGCTCCGCCGCCACCGGTAAATGACGAAGAAGAGCATGTGGCTTTGGGACATTCTAGAAGGCCGAAATTCTCAGCTCCTCCTCCACCGCCGAATTTGACGCATCTCCGGTCAACACTCACAAAAACACCCCCGCACGTGACCGGGAATCCACTTAATCATCGCCCACCACCACCGCCGCCTCCTCCTCCTCCTCTACCACCGCGAAAAACAGGGTCTCCAGGAGTCAGCGTTTCCTCATCTTCTGTATCGAGAAAGCAACAGTCTCGTTCTCCAACTGAGGTATCTAATTCTGGTGTTAGTGTGAGTAAAGAAGGTTCAGAGCAAAACGGAAATGGAGATGGCGAGAAAAGCGTGAGCTCTTCCGAGAGGCATGAAGCCAATGAAACGGAAGGAGCGAAACCCAAGTTAAAAGCTTTGCATTGGGATAAGGTCCGTGCTTCCTCAGATCGTGCTACTGTGTGGGACCAATTAAAATCAAGTTCCTTCCAATTGAATGAAGACATGATGGAGTCTTTGTTTGGTTGTAATGCCACTAACTCTGCTCCTAAAGAACCTCCCAAGAAACCGCTTCTTCCTTCCATTGATCATCACAACAGGGTCCTTGATCCCAAGAAGTCTCAGAACATAGCTATATTACTCAGGGCACTTAATGTCACCAGAGATGAGGTCTCCGAAGCTCTTTTAGATGGAAATCCTGAAGGTTTGGGTGCTGAGCTATTGGAAACACTAGTTAAGATGGCTCCTACTAAAGAGGAAGAGATAAAACTAAAAAACTACAATGGTGACCTCTCAAAACTTGGGTCAGCGGAAAGGTTTCTTAAAGCTGTGCTTGATATCCCTTTTGCATTTAAAAGAGTTGAAGCTATGCTATATAGGGCCAACTTTGATTCAGAAGTCAACTATCTCAGGAAGTCTTTTCAAACCCTGGAGGCAGCAAGTGAGGAATTAAGGAACAGCCGATTATTCCTCAAACTCCTTGAAGCTGTTCTCAGGACAGGAAACAGAATGAATGTCGGCACCAACAGAGGCGATGCCAAAGCTTTTAAACTCGACACACTCCTAAAACTCGTAGATATAAAGGGTACAGATGGAAAGACCACATTGCTTCACTTTGTGGTCCAGGAGATTATTAGATCTGAAGATGCAGGAGGGGAATCCGCAAATGGTAGCGTTCAGAACCAAATGAATTCCAAATTTAATGAGGATGAGTTTAAGAAGCAAGGATTACAAGTTGTGGCTGGGCTGAGTAGAGACCTTAGTAATGTTAAAAAAGCAGCAGGAATGGATTCAGATGTCTTAAGTAGCTATGTTTCGAAGCTCGAAACAGGACTCGATAAAGTGCGGCAGGTATTGCAATACGAGAAGCCAGATACGCAAGGGAATTTCTTCAACTCCACGAAGCAATTTCTGAGATATGCTGAAGAAGAAATCACGAGGATTAAGGCTGATGAGAAAAAGGCTTTGTTCCTTGTGAAAGAAGTAACAGAATACTTCCATGGGAATGCAGCAAAAGAAGAAGCCCACCCTTTAAGAATCTTTATGATTGTAAGAGACTTCCTAAATATTCTAGATCTGGTGTGCAAGGAAGTGGGAAGGATGCACGACAGAATTGTCGGCTCCGCGAGATCATTCCGCATGGCTGCGAGTGCACCATTACCTGTTCTCAACAGGTACAATGCAAAGCAGGATACAAGCTCGGACGAGGAAAGCTCATCCCTCTAG 2688 0.4892 MKFSFHLHNSHSLFFIIIIIIISLLSILSIAKPLNESRITRRILHQPLFPAASVPPPAPAQLPPPVETPPSPDTNIPFFHEYPAGPPPDQPQSPPSTTANSTIANPTATQPTKGTKKVAIAISVGIVTLGMLSALAFFLYKHRAKHPVETQKLVGGNSQRNIDDSRAQPPSSFLYIGTVEPTRTSASDPIRSPYHKLNSVKRSDRYRPSPELQPLPPLTKPTPDGNFPPAVSPSSSSDEESHDTVFHSPQNSSVRDDDGYFTPVSRQSYLSNGSPAAVAPVRREANSSTPTQVPFSKRTSPKSRFSAPSPDVRHVIIPPMKKAPPPPVNDEEEHVALGHSRRPKFSAPPPPPNLTHLRSTLTKTPPHVTGNPLNHRPPPPPPPPPPLPPRKTGSPGVSVSSSSVSRKQQSRSPTEVSNSGVSVSKEGSEQNGNGDGEKSVSSSERHEANETEGAKPKLKALHWDKVRASSDRATVWDQLKSSSFQLNEDMMESLFGCNATNSAPKEPPKKPLLPSIDHHNRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLKNYNGDLSKLGSAERFLKAVLDIPFAFKRVEAMLYRANFDSEVNYLRKSFQTLEAASEELRNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEDAGGESANGSVQNQMNSKFNEDEFKKQGLQVVAGLSRDLSNVKKAAGMDSDVLSSYVSKLETGLDKVRQVLQYEKPDTQGNFFNSTKQFLRYAEEEITRIKADEKKALFLVKEVTEYFHGNAAKEEAHPLRIFMIVRDFLNILDLVCKEVGRMHDRIVGSARSFRMAASAPLPVLNRYNAKQDTSSDEESSSL 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241690g00010 895 MobiDBLite consensus disorder prediction 151 461 - -
Stsc241690g00010 895 ProSiteProfiles Formin homology-2 (FH2) domain profile. 448 871 IPR015425 -
Stsc241690g00010 895 MobiDBLite consensus disorder prediction 95 115 - -
Stsc241690g00010 895 MobiDBLite consensus disorder prediction 371 392 - -
Stsc241690g00010 895 Gene3D Formin, FH2 domain 442 856 IPR042201 -
Stsc241690g00010 895 Pfam Formin Homology 2 Domain 451 845 IPR015425 -
Stsc241690g00010 895 MobiDBLite consensus disorder prediction 152 192 - -
Stsc241690g00010 895 MobiDBLite consensus disorder prediction 55 72 - -
Stsc241690g00010 895 SMART it6_source 448 860 IPR015425 -
Stsc241690g00010 895 MobiDBLite consensus disorder prediction 394 438 - -
Stsc241690g00010 895 MobiDBLite consensus disorder prediction 326 340 - -
Stsc241690g00010 895 PANTHER FORMIN-RELATED 22 889 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Stsc241690g00010 895 MobiDBLite consensus disorder prediction 210 228 - -
Stsc241690g00010 895 SUPERFAMILY Formin homology 2 domain (FH2 domain) 377 856 - -
Stsc241690g00010 895 MobiDBLite consensus disorder prediction 284 306 - -
Stsc241690g00010 895 MobiDBLite consensus disorder prediction 246 274 - -
Stsc241690g00010 895 MobiDBLite consensus disorder prediction 55 115 - -
Stsc241690g00010 895 MobiDBLite consensus disorder prediction 439 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241690g00010 Stsc-Chr241690 88954 93538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241690g00010 392 885 FH2 protein (formin) Gene Family AT5G67470 68.463 0.0 662