Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241690g00007 ATGGGTGATGAGTTTCATTGTGGTGTGGTTATAAGAGAGTTTGATCCTAAGAGAGACAGAGAAAAAGTAGAAGAAGTAGAGAGAATATGTGAGGTTGGACCCAGTGGAAAGCTCTCTATCTTCACCGACCTCCTCGGTGACCCAATCTGCAGGGTCCGCCACTCACCTTCTTTCCTCATGCTGGTGGCGGAGATTGGAGATGAGATAGTGGGAATGATAAGGGGTTGCATCAAAACCATCACGTGCGGAAAGAAGCTCTCCAGAAACTCCAAACACAGCAGCGACACTAGTAATAAGCACCTCCCTGTTTACGCTAAAGTTGCCTACATATTAGGCCTTCGAGTTTCTCCCTCTCACAGGAGAATGGGAATAGGATTGGAGCTGGTGCATCGAACGGAGGCATGGTTCAGAGATAATGGTGCTGAGTACTCCTACATGGCAACGGAAAACGACAATTTAGCATCCGTTAAACTCTTCACCGACAAATGCGGTTACACAAAGTTCCGTACTCCTTCCATCCTTGTCAACCCCGTTTTCGCTCACCGTCTCACCCTCTCCCCGAAGGTCAAAATCATCCACCTCACCCCATCCCAAGCAGAAGCCATCTACCGCCGCCGATTCGCCACCACCGAGTTCTTCCCCCGCGACATCGACGCTGTCCTCAACAACAAGCTTTCCCTCGGAACCTTCCTCGCCCTTCCCGCCGGCGCCACCTGGAAAGGCACGGATCACTTCTTCTCTGACCCACCCAACTCGTGGGCCATACTCAGCCTATGGAACTCCAAGGAAGTTTTCACGCTCCAGGTACGTGGCGCGTCGCGCGTGAAACGTGCGCTTGCTAAAACAACGCGCGTGGTTGACAAGGCTTTACCGTTTCTACGGTTACCGTCATTTCCGGACTTCTTTAGGCCGTTTGGGTTTCACTTCGTGTACGGGATAGGAGGTGAAGGTCCCGAGGCGGTTAAGATGGTTAAGACTTTATGCGCCTTCGCGCATAACGTGGCTAAAGAACGTGGTTGCGGCGCGGTAGTTACCGAAGTGTCTGGTCAAGAACCGTTACGGTTTGGGATACCGCACTGGAAGAGGCTATCTTGCGCCGAGGACCTTTGGTGCATTAAGAGGCTAGGTGAGGATTACAGCGACGGCTCTGTTGGTGACTGGACCAAATCTGCACCTGGAATTTCCATTTTTGTTGACCCAAGAGAAGTCTGA 1212 0.5173 MGDEFHCGVVIREFDPKRDREKVEEVERICEVGPSGKLSIFTDLLGDPICRVRHSPSFLMLVAEIGDEIVGMIRGCIKTITCGKKLSRNSKHSSDTSNKHLPVYAKVAYILGLRVSPSHRRMGIGLELVHRTEAWFRDNGAEYSYMATENDNLASVKLFTDKCGYTKFRTPSILVNPVFAHRLTLSPKVKIIHLTPSQAEAIYRRRFATTEFFPRDIDAVLNNKLSLGTFLALPAGATWKGTDHFFSDPPNSWAILSLWNSKEVFTLQVRGASRVKRALAKTTRVVDKALPFLRLPSFPDFFRPFGFHFVYGIGGEGPEAVKMVKTLCAFAHNVAKERGCGAVVTEVSGQEPLRFGIPHWKRLSCAEDLWCIKRLGEDYSDGSVGDWTKSAPGISIFVDPREV 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241690g00007 403 Gene3D - 41 171 - -
Stsc241690g00007 403 Pfam Acetyltransferase (GNAT) family 54 165 IPR000182 GO:0016747
Stsc241690g00007 403 FunFam Probable N-acetyltransferase HLS1-like 18 172 - -
Stsc241690g00007 403 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 186 IPR000182 GO:0016747
Stsc241690g00007 403 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 9 403 - -
Stsc241690g00007 403 CDD NAT_SF 60 143 - -
Stsc241690g00007 403 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 45 169 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241690g00007 Stsc-Chr241690 56729 59079 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc241690g00007 Acetyltransf_1 1.2e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241690g00007 - - gmx:100800613 638.647