Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241690g00002 ATGAGTTGCAACGGGTGCCGAGTCCTTAGGAAGGGTTGCAGCGAGTCATGCATCTTAAGGCCATGCCTTCAGTGGATCGAAACCCCGGAGGCCCAAGGCCACGCCACCGTCTTCGTAGCCAAATTCTTCGGCCGCGCCGGCCTCATGTCCTTCATTTCCAATGTCCCTGAGCCCCAAAGACCCGCTCTTTTTCAGTCTCTACTGTTTGAAGCGTGTGGGCGAACGGTTAACCCGGTTAACGGTGCCGTTGGACTGCTGTGGACCGGGAACTGGCACGTGTGCCAGGCCGCCGTTGAGACGGTGCTCCGAGGAGGATCCCTCAGGCCCATGCCGGAGCTACTCGGTCTCGACGCGCCTGCTCCCGTCGCCGTTGACGATGGCTCAGAAGGGGAAGTCACGTGCGCCGATGCCCGTAGGCTCCGAGATCCGAGCCCGAACATAAGGTTCACGAGCACCCGATCCGGCAAAGGAAGTTCCGGCGGGAAGCGGAAGCGATCGGAGGAGTCGATGATGACGACGGCGGATCTTAACCTTCGGCTGACGCCGAGTTTCATGCAGAGCGGGTGCCGGCAGGAAATTCGGCGGCCGGGATCGCCGTCGATGAATTCGGAGGAATCGGTGACGACGACAGCTCGCTTGGATAGCGGACTCGGAGATAACTACGGTCACGGCGGAGAACGGAAAGTCCTCAACCTTTTCATATGA 705 0.6014 MSCNGCRVLRKGCSESCILRPCLQWIETPEAQGHATVFVAKFFGRAGLMSFISNVPEPQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGSLRPMPELLGLDAPAPVAVDDGSEGEVTCADARRLRDPSPNIRFTSTRSGKGSSGGKRKRSEESMMTTADLNLRLTPSFMQSGCRQEIRRPGSPSMNSEESVTTTARLDSGLGDNYGHGGERKVLNLFI 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241690g00002 234 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Stsc241690g00002 234 MobiDBLite consensus disorder prediction 191 219 - -
Stsc241690g00002 234 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Stsc241690g00002 234 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 210 - -
Stsc241690g00002 234 MobiDBLite consensus disorder prediction 196 215 - -
Stsc241690g00002 234 MobiDBLite consensus disorder prediction 125 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241690g00002 Stsc-Chr241690 18280 19073 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241690g00002 1 233 AS2 family AT3G49940 58.000 1.01e-83 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc241690g00002 LOB 8.8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241690g00002 - - gmx:100816189 377.867