Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241688g00006 ATGAAGAACATATGGGTTGTTGTGTTGGTAGCCATGTTTATGATGATTAGTGAGTTTAATAAAGGAGAAGGGCAATTAGTAGAGAATTTCTATGGTCAAACATGTCCAAACGTGGAATCAATTGTGAAACAGGCAGTTACCACTAAGTTTTCTCAAACTATTACAACTGGACAAGCAACTCTGCGTTTGTTCTTCCATGATTGCTTTGTTCAGGGTTGTGATGCGTCAGTGATGATAGCATTGCCAAACGGGGGTGCAGAGAAAGATGCCTCAGAAAATCTGTCACTAGCAGGAGATGGCTTTGATACAGTGGTTAAGGCCAAATCAGCTGTTGAAGCCTCATGCCCTGGCGTTGTTTCTTGTGCAGACATTTTGGCTCTCGCTACAAGAGATGTTATTGGCTTGCTTGGTGGGCCTTCATACAGTGTAGAACTTGGACGCAGAGATGGCCTTGTTTCCAAAGCATCAGATGTGAACTCTAACCTTCCCAAAGCAGGTTTCAACCTCAACCAACTAAACACAATGTTCTCAAAACACAACCTCACCCAAACCGACATGATTGCACTCTCCGGAGCACACACCGTTGGCTTCTCACACTGCAACCAACTCTCAAACCGTTTATACTCCTTCCCATCATCCTCACACGTGGACCCCACAATGAATCCAAGCTATGCCCAACAACTTATTTCTGAGTGCCCTCAAAGCGTTGACCCAAGCGTCGTTGTAGCTCTTGACCCACAAACTTCCTTCACTTTTGATAACTTGTATTACAAGAACTTGGTTAACGGCCAGGGGCTGTTGAGTTCGGACCAGGTTCTGTTTACGGACCCTAAGTCGCAGTCCACCGTGGTCGATTTCGCGAATAATCCGAACGACTTCACGGCCGCGTTTGTTACAGCCATGAGGAAGCTTGGAAGAGTGGGTGTCAAGACTGGTAATCAGGGAGAGATTAGAAGAGACTGTACAACGTTCAACTCATAA 981 0.4557 MKNIWVVVLVAMFMMISEFNKGEGQLVENFYGQTCPNVESIVKQAVTTKFSQTITTGQATLRLFFHDCFVQGCDASVMIALPNGGAEKDASENLSLAGDGFDTVVKAKSAVEASCPGVVSCADILALATRDVIGLLGGPSYSVELGRRDGLVSKASDVNSNLPKAGFNLNQLNTMFSKHNLTQTDMIALSGAHTVGFSHCNQLSNRLYSFPSSSHVDPTMNPSYAQQLISECPQSVDPSVVVALDPQTSFTFDNLYYKNLVNGQGLLSSDQVLFTDPKSQSTVVDFANNPNDFTAAFVTAMRKLGRVGVKTGNQGEIRRDCTTFNS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241688g00006 326 Gene3D Peroxidase, domain 2 163 304 - -
Stsc241688g00006 326 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Stsc241688g00006 326 FunFam Peroxidase 163 304 - -
Stsc241688g00006 326 Pfam Peroxidase 42 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241688g00006 326 SUPERFAMILY Heme-dependent peroxidases 25 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc241688g00006 326 ProSiteProfiles Plant heme peroxidase family profile. 25 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241688g00006 326 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241688g00006 326 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241688g00006 326 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241688g00006 326 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241688g00006 326 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241688g00006 326 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241688g00006 326 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241688g00006 326 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241688g00006 326 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241688g00006 326 PANTHER - 7 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241688g00006 326 FunFam Peroxidase 29 175 - -
Stsc241688g00006 326 CDD secretory_peroxidase 25 321 IPR033905 GO:0004601|GO:0042744
Stsc241688g00006 326 Gene3D - 29 325 - -
Stsc241688g00006 326 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241688g00006 326 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241688g00006 326 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241688g00006 326 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241688g00006 326 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241688g00006 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241688g00006 Stsc-Chr241688 27768 31038 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241688g00006 4 325 Peroxidase AT5G14130 62.422 5.68e-144 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241688g00006 K00430 - gmx:100812082 492.271