LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc241688g00001	ATGGTTGGTGTGGCCAAAGATCTTGGTGACTCTGTTGGCTTTCTCACTGGTATTCTCTGTGAGATTTTGCCTATTTGGGCTGCTCTTCTTGTTGGTTCTCTCCTTAACCTTGTTGGCTATGGTCGGTTTGGTTGCTTGTCACTGGCAGAGTACCAACTCTACCTTTATGGGCTAAGTAAAGTCATTTCCCTCAGTGATATTTGTGCTCTAATATTCATCGGAACAAATGGCGAAACCTACTTCAACACAGTTTCTCTGGTGTCATGCATACAAAACTTTCCGAAAAGCCGAGGTCCCGTGGTTGGAATCCTAAAGGGCTTTGCAGGCCTTAGTGGTGCAATATTGACACAAACATATGCACTGATCCATTCCCCTGATCATGCGTCATTGATATTCATGGTCGCGGTCGGTCCGGCAATGGTCGGAGTAGGCCTAATGTTTGTCGTCCGACCGATCGGAGGGCGCAAACAAGTTCGTCCATCTCCATCAGATGACAAAAACTTCACATTCATATATGGAGTTTGCCTCCTTCTAGCAGCTTACCTAATGGGGGTCATGGTTGTCCAAGATCTAGTTTCTGTGAGTAACACCATGGTAACTGTTTTCACAATCATCCTATTCTTGATCCTCCTTGTCCCGGTTGCCATTCCGGTTTCGCTAGCTTTCGGCACGAATCAAAAGGCTTCAGAGGAAGAGGCAATTCTTCTTCCTGTAGCACAGAGTAGTAGTAAGGCCGTACAGGATTATGAGGAGGGACTATTGAGTGAGGTGGAAGAGGAAAAGCCCAAGGAAGTGGACTCGCTTCCGGCGCAAGAAAGGCGAAAGTGTATAGTGCAGTTGCAATTGAGGCTAGTTCAGGCAGCAGCAGATGGAGCTGTGAGAGTTAAGAGGAGAAGAGGGCCACACAGGGGAGAGGATTTTACTCTGAGACAAGCTTTGGTTAAAGCAGATTTTTGGCTTCTCTTCATTTCCATGATCATGGGCTCTGGATCTGGCTTAACTGTAATTGACAATTTGGGTCAGATGAGCCAGTCTCTTGGATATGGCAATGCTCATATTTTTGTTTCCTTGGTCAGTATCTGGAACTTCCTTGGCCGTGTTGGAGGTGGTTACATTTCTGAGCTTGTTGTGAGGAATCATGCATATCCAAGAGCAGCAGCTCTCGCAGTGTTTCAACTGATTATGACATTTGGGCATCTCTTCATTGGCATGGGATGGCCAGGGTCCATGTATTTCAGCACTCTACTCATTGGACTTGGTTATGGTGCTCATTGGGCAATTGTTCCTGCTACTGCCTCTGAATTATTCGGTTTGAGAAACTTCGGCGCCTTGTACAATTTTATCACTCTCTCAAACCCCATGGGAACTCTTGTCTTCTCCAGTTTCATTGCAAGCAGAATCTATGATCATGAAGCAGAGAAACAAGCCCTTACCGACCCACTAGAGTGTAATGGTTCCATATGCCTTTTCCTCACTTCTGTCATCATGGCTGGACTATGTATCCTTGGGGCACTCTTGTGCATGATTCTAGTGTTTCGAACAAAGATTGTTTATGCTAACTTATATGGAAAATCTTCCCGCCATAACCTTCGATAG	1596	0.4568	MVGVAKDLGDSVGFLTGILCEILPIWAALLVGSLLNLVGYGRFGCLSLAEYQLYLYGLSKVISLSDICALIFIGTNGETYFNTVSLVSCIQNFPKSRGPVVGILKGFAGLSGAILTQTYALIHSPDHASLIFMVAVGPAMVGVGLMFVVRPIGGRKQVRPSPSDDKNFTFIYGVCLLLAAYLMGVMVVQDLVSVSNTMVTVFTIILFLILLVPVAIPVSLAFGTNQKASEEEAILLPVAQSSSKAVQDYEEGLLSEVEEEKPKEVDSLPAQERRKCIVQLQLRLVQAAADGAVRVKRRRGPHRGEDFTLRQALVKADFWLLFISMIMGSGSGLTVIDNLGQMSQSLGYGNAHIFVSLVSIWNFLGRVGGGYISELVVRNHAYPRAAALAVFQLIMTFGHLFIGMGWPGSMYFSTLLIGLGYGAHWAIVPATASELFGLRNFGALYNFITLSNPMGTLVFSSFIASRIYDHEAEKQALTDPLECNGSICLFLTSVIMAGLCILGALLCMILVFRTKIVYANLYGKSSRHNLR	531

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc241688g00001	531	Pfam	Nodulin-like	2	218	IPR010658	-
	Stsc241688g00001	531	Gene3D	MFS general substrate transporter like domains	167	515	IPR036259	-
	Stsc241688g00001	531	PANTHER	UNCHARACTERIZED NODULIN-LIKE PROTEIN	2	519	-	-
	Stsc241688g00001	531	SUPERFAMILY	MFS general substrate transporter	169	515	IPR036259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc241688g00001	Stsc-Chr241688	6661	9168	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc241688g00001	2	525	Nodulin-like Gene Family	AT5G14120	64.850	0.0	658

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc241688g00001	-		-	adu:107473816	780.4