Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241687g00021 ATGGAAGTGGTGGTAAGAGTGTTCAATCCAAATAAAGATAGAGAAGGAGTAGAAGCTGTTGAGAGAATATGTGAAGTTGGACCTCGTGACAAGCTTTCCCTTTTCACCGACCTCCGTGGTGACCCTGTTTGCAGGATCCGTCACTCCCCCACCTTCCTCATGCTAGTGGCTGAATTGGGCAATGAAATAGTAGGCATGACAAGAGGTTGCATCAAAACCGTTACATGTGGAAAGAAGGCTCACAAACACGGGAAAAACAACCAAGCAGCAGATTCTACCACCGCGAAACCAATGCCTGTCTATACCAAACTCGCCTACATATTAGGTCTTCGAGTCTCACCACTCTATAGGAGGATGGGTATAGGTCTTAAGCTTGTATGGGCAATGGAGGAATGGTTTAGAGAGAATGGTGCTGAGTATTCATACATCGCAACAGAAAACGACAACTTTGCGTCCATTAATCTCTTTACAGACAAATGCGGTTACTCCAAGTTTCGAACTCCGTCTATTCTGGTCAACCCTGTTTATGAGCACCGAGTAAAAACCTCTTCAAAGGTTAGAATCATAAAGCTCGACCAAAGGGATGCCGAATCACTATACCGACTCAAATTCTCCACCACGGAATTCTTCCCTCGCGACATTGACTCTGTTCTCAACAACAACCTCTCACTCGGAACCTTTTTAGCGGTTCCGAAAGATAGTTACAGGCCTGATATGTGGCCCGGCCCGACACAATTTCTTGCTTCCCCGCCTCACTCTTGGGCCGTCCTCAGCGTTTGGAACTGCAAAGACGTTTTCACACTAGAGGTGAGAGGCGCGTCACGCGTGAAGCGGGTTTTAGCGAAAACGACACGTGTGGTTGACCGGGCTTTACCGTGGCTACGGCTTCCTTCGATACCGAATTTCTTCAGGCCGTTCGGGTTTCATTTCATGTATGGGCTTGGAGGGGAGGGGCCTGAAGCGGTTAAGATGGTTCGGGCTTTGTGTGGGTTTGCACACAACTTGGCGAAGGAGAAAGGGTGTGGGGCGGTGGTGACAGAGGTTTCGAGTCGGGAGCCACTGCGGTTAGGGGTGCCGCACTGGAAGATGCTGTCATGTGAGGAAGATCTATGGTGCATAAAACGGTTAGGGGAGGATTATAGTGATGGATCTGTTGGTGACTGGACCAAATCTCCACCTGAATTTTCAATTTTCGTTGACCCTAGAGAGGTCTGA 1215 0.4872 MEVVVRVFNPNKDREGVEAVERICEVGPRDKLSLFTDLRGDPVCRIRHSPTFLMLVAELGNEIVGMTRGCIKTVTCGKKAHKHGKNNQAADSTTAKPMPVYTKLAYILGLRVSPLYRRMGIGLKLVWAMEEWFRENGAEYSYIATENDNFASINLFTDKCGYSKFRTPSILVNPVYEHRVKTSSKVRIIKLDQRDAESLYRLKFSTTEFFPRDIDSVLNNNLSLGTFLAVPKDSYRPDMWPGPTQFLASPPHSWAVLSVWNCKDVFTLEVRGASRVKRVLAKTTRVVDRALPWLRLPSIPNFFRPFGFHFMYGLGGEGPEAVKMVRALCGFAHNLAKEKGCGAVVTEVSSREPLRLGVPHWKMLSCEEDLWCIKRLGEDYSDGSVGDWTKSPPEFSIFVDPREV 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241687g00021 404 Gene3D - 42 169 - -
Stsc241687g00021 404 Pfam Acetyltransferase (GNAT) family 47 162 IPR000182 GO:0016747
Stsc241687g00021 404 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 3 165 IPR016181 -
Stsc241687g00021 404 CDD NAT_SF 54 140 - -
Stsc241687g00021 404 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 3 182 IPR000182 GO:0016747
Stsc241687g00021 404 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 2 404 - -
Stsc241687g00021 404 FunFam Probable N-acetyltransferase HLS1-like 12 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241687g00021 Stsc-Chr241687 127527 129011 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc241687g00021 Acetyltransf_1 1.1e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241687g00021 - - mnt:21389359 646.351