Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241687g00002 ATGAAAACTCATCATTGGAGCTCCTTCTTTTTCATCTTATCATTGGAATTTTGGTCCCTCCTCCTCTTCTTTCCCTCAGCAAAAGCCCTCAACGCATTTCAATTATTATCTCAGAATGCTTCAACAAAATCTAACTCAAGAAGAATCCTACATCAACCGCTATTTCCGGCAGCGTCAGCTCCGGTGGCGTTGCCACCGCCTCCGCCAACACCGGACACTCCTTCCTCTCCGGACATTCCTTTCTTCAACGAGAATCCACCAGGTCCGCCGCCGGCAGACCTTAACCAGCAGCCAGCGGCGGCCACTGCTAACGGCGGAATTGCGAATCCAACGGCAACGCAGCCGGCAAAGCCAGTTAAGACAGTGGCGATTGTGGTCTCCGTCGCGTTCGTGACGTTTGCAATGCTGTTTGTGCTGGCGTTCTTCTTATACAAGCAAACAGCAAAGCAGCAGCCACCGGAGACGACGCAGAAGCTGGTGGCCGCCGAGTCACGAAACGACTTGCCAACAGCGGCGCCACCTTCTAGTCTATACTACATCGGGACGGTGGATCCGAGCAGAGTGTCGGTGAGTGAACCGAGCGAAGAAGCCACTGCCAGTGAAATGAACCGTTCGTCTTCGTCATACAGAAAACTGAATTCGAAGAAGGTTTCCGAAAGGTACCGTCCCAGTCCAGAGCTTCAGCCATTGCCACCGCTAAGCAAAACCGTCGCCGACGGCAGCCATCCACCACCGGCTGCCTCCTCGTCATCTTCGTCCGATGATGAGGAAGATAGCCGCGAAACGGCCTTTCACTCGCCACAGGCGTCGTCATCTCTCAGCATCGACGACGGTTACCACACGCCGGTGTCCCGCCATAGTTATTTCTCCAACGGCAGTAACAGTTCTGCGGCGGCACCACCGCCAGTTCCTTTTTCGAAGAGAACTTCTCCGAAGTCTCGGAATTCAGCTTCGTCGGATACCAAACTCGCCATGATAATACCACCTATAAAACATGCTCCGCAGCAAGAATCTATCTCCGGTCCCTCCAGACGGCCGAGATTTGCGGCACCTCCTCCGGCACCAAATTTAACTCATATTCATTCAAATATGTCCACAAATTCCATCAATCCGCCGCCTCCTCCGCCACCACCTCCTCCGCCGCGGAAGGTTCGCTCTCAGGCAATAAATTTGACCTCCTCCTCGTCGTCCTCCTCCTCTGCTTCAAGAATGCAGCAGGAATCTTGGTCTGGGAGCCAAGTTGCAGCATCTGCAGCAAAGAGCATTGCAAAGGCTTCGGAGGAATTTAACAAGATGAAGAGAGTGGCATCATCTGAGAAGTTAAAGTCAAGCTCGTTTCAGTTAAATGAGGGCATGATGGAGTCTCTTTTTGGGTGCGGTGGAGGGAGTTCTGCGCCTAAAGAGACGGTTACAAGGAAATCAGTTATTCCGACAGTCGAACATGAGAACAGGGTGTTAGACCCCAAGAAGTCCCAAAACATTGCTATAATGCTAAGGGCACTAAATGTTACTAGAGACGAGGTCTCCGAAGCTCTCTTGGACGGGAATCCTGAAGGTCTGGGTGCTGAGCTATTGGAAACTCTTGTAAAGATGGCACCAACTAAAGAGGAAGAAATAAAACTCAAAAGCTATGATGCTGGTCTTCCAAAACTAGGCTCTGCAGAGAGATTCCTTAAAACTGTTCTTGACATACCATTCGCTTTCAAAAGAGTGGAAGCCATGCTTTACAGAGCCAATTTCGACACAGAAGTTAACTACCTTAGGAAATCCTTTCAAACTCTCGAAACAGCGAGTGAGGAGTTGAAGAACAGCCGGTTGTTCCTCAAACTCCTCGAAGCTGTTCTTAGGACCGGGAACAGAATGAATGTCGGAACCTATCGTGGCGATGCCACCGCGTTCAAGCTAGACACACTACTAAAACTTGTAGATATAAAGGGAACAGATAGAAAGACCACATTGCTTCACTTTGTTGTACAAGAAATCATTAGAACGAAAGGCTCAACCGGCGAATCGTCGAACGAAAATGTGCCGACAGAAATGAATTCTCAGTTTAATGATGAGGAGTTCAGAAAGAAAGGATTGCAGGTTGTGGCTGGACTGAGTAGAGACCTTGGAAACGTAAAAAAATCTGCAGGAATGGACTCAGAAGTCTTAAGTAGTTACGTGTCGAAGCTCGAATCGGGTCTTGATAAAGTGAGATTGATTTTGCAGCACGAAAAGCCGGATATGCAGGAGAATTTCTTCAACTCAATGAAGCTATTTCTGAAAGAGGCGGAAGCGAAAATCGTTATGATTAAGTCTGATGAGAGAAAGGCTTTGTTCCTTGTTAAAGAAGTAACAGAGTACTTTCATGGGAATACCGCAAAGGAAGAAGCACACCCTTTTAGAATTTTCATGATTGTGAGAGACTTTCTCAATATTTTGGATCAGGTCTGCAAAGAAGTGGGGAAGATGCAAGAAAGAACTGTGATTGGTTCGGCGAGATCCTTCCGGATAGCTGCGAGCGCGTCGTTACCGGTTCTCAACAGGTACCGTACGAGGCAAGATACAACAAGTTCAGAAGAGGACAGCTCATCCCCTTAG 2583 0.4859 MKTHHWSSFFFILSLEFWSLLLFFPSAKALNAFQLLSQNASTKSNSRRILHQPLFPAASAPVALPPPPPTPDTPSSPDIPFFNENPPGPPPADLNQQPAAATANGGIANPTATQPAKPVKTVAIVVSVAFVTFAMLFVLAFFLYKQTAKQQPPETTQKLVAAESRNDLPTAAPPSSLYYIGTVDPSRVSVSEPSEEATASEMNRSSSSYRKLNSKKVSERYRPSPELQPLPPLSKTVADGSHPPPAASSSSSSDDEEDSRETAFHSPQASSSLSIDDGYHTPVSRHSYFSNGSNSSAAAPPPVPFSKRTSPKSRNSASSDTKLAMIIPPIKHAPQQESISGPSRRPRFAAPPPAPNLTHIHSNMSTNSINPPPPPPPPPPPRKVRSQAINLTSSSSSSSSASRMQQESWSGSQVAASAAKSIAKASEEFNKMKRVASSEKLKSSSFQLNEGMMESLFGCGGGSSAPKETVTRKSVIPTVEHENRVLDPKKSQNIAIMLRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLKSYDAGLPKLGSAERFLKTVLDIPFAFKRVEAMLYRANFDTEVNYLRKSFQTLETASEELKNSRLFLKLLEAVLRTGNRMNVGTYRGDATAFKLDTLLKLVDIKGTDRKTTLLHFVVQEIIRTKGSTGESSNENVPTEMNSQFNDEEFRKKGLQVVAGLSRDLGNVKKSAGMDSEVLSSYVSKLESGLDKVRLILQHEKPDMQENFFNSMKLFLKEAEAKIVMIKSDERKALFLVKEVTEYFHGNTAKEEAHPFRIFMIVRDFLNILDQVCKEVGKMQERTVIGSARSFRIAASASLPVLNRYRTRQDTTSSEEDSSSP 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241687g00002 860 Gene3D Formin, FH2 domain 423 833 IPR042201 -
Stsc241687g00002 860 MobiDBLite consensus disorder prediction 187 212 - -
Stsc241687g00002 860 MobiDBLite consensus disorder prediction 308 322 - -
Stsc241687g00002 860 MobiDBLite consensus disorder prediction 368 384 - -
Stsc241687g00002 860 MobiDBLite consensus disorder prediction 186 412 - -
Stsc241687g00002 860 PANTHER FORMIN-RELATED 15 852 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Stsc241687g00002 860 SMART it6_source 374 823 IPR015425 -
Stsc241687g00002 860 MobiDBLite consensus disorder prediction 60 94 - -
Stsc241687g00002 860 ProSiteProfiles Formin homology-2 (FH2) domain profile. 394 834 IPR015425 -
Stsc241687g00002 860 MobiDBLite consensus disorder prediction 60 114 - -
Stsc241687g00002 860 MobiDBLite consensus disorder prediction 264 300 - -
Stsc241687g00002 860 Pfam Formin Homology 2 Domain 439 808 IPR015425 -
Stsc241687g00002 860 MobiDBLite consensus disorder prediction 97 114 - -
Stsc241687g00002 860 SUPERFAMILY Formin homology 2 domain (FH2 domain) 371 822 - -
Stsc241687g00002 860 MobiDBLite consensus disorder prediction 386 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241687g00002 Stsc-Chr241687 9523 15566 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241687g00002 434 851 FH2 protein (formin) Gene Family AT5G67470 73.634 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241687g00002 - - gmx:100803578 845.499