Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241686g00038 ATGGATCGAGCTACTGGATCCGCAATGAATCTAGCGAGACATGGAAATGTTCGTGCTGATTCCATTGTTCCTCCTACGGGCCTCAATATTGTACAACCTAATGTTACAATAACGAGGTACTTGACAATAAGATATGGGATGACACAATTCAGTAGGATTCAATTAATTCATCAACATAATCTTGGTATGAGTTTTCGACCTCCACAGCCCAACTTTTCTTATTCTTGGACGAGCACCGGTGCATTACCTCTGTCTCTAAATCATGGAGCACTTGGTCAGTTACCAGAATCTTCAGCAATCAATATTTATGAAACCTCAATGGACAATTCAAGTTTGGGTAATAGAATATATTCAAGGCACCAGAACTTGCATTATCTTCAAACATTGTCTATGCTAATGAGGAGAAGCCACTCTATGATTTATGATCCTACAACTACTGCTTGTGTGCATAGTCATGGAGTTGATAATGGTCTTGGAATGCTTGCTAATCATGATAGAGATGTTGAAGATATGTCTGATGATGCATTGGCAGAGGAGATTGCCAATTTAAACAATCAAATGAAGATAAAGCCATATATAAATTTAAATTTGGAGGAGGTAACTTCTGATGACGAGATGGAAGCTGATCTTTATGTAATATGTCAGGAAAAATTTAAGAATGAAGATATGCTTGGAGTTCTTGAATGTAGGCATGAATTTTATGCGGATTGTTTGAGAACATGGTTGCTTGAGAAAAATTTCTGCCCCCTTTGTAGATTACAAGTTTGA 768 0.3737 MDRATGSAMNLARHGNVRADSIVPPTGLNIVQPNVTITRYLTIRYGMTQFSRIQLIHQHNLGMSFRPPQPNFSYSWTSTGALPLSLNHGALGQLPESSAINIYETSMDNSSLGNRIYSRHQNLHYLQTLSMLMRRSHSMIYDPTTTACVHSHGVDNGLGMLANHDRDVEDMSDDALAEEIANLNNQMKIKPYINLNLEEVTSDDEMEADLYVICQEKFKNEDMLGVLECRHEFYADCLRTWLLEKNFCPLCRLQV 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241686g00038 255 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 167 255 IPR013083 -
Stsc241686g00038 255 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 51 252 IPR045191 GO:0061630
Stsc241686g00038 255 Pfam Ring finger domain 213 252 IPR001841 -
Stsc241686g00038 255 SUPERFAMILY RING/U-box 212 254 - -
Stsc241686g00038 255 ProSiteProfiles Zinc finger RING-type profile. 213 252 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241686g00038 159 255 C3H Transcription Factor Family AT2G15530 31.858 1.41e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241686g00038 - K19041 adu:107478552 101.679