Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241686g00011 ATGAACGGAGAAAGGAGGCAGAGATCTGGTGCGGCGGGGGTGCACCATCAGCGCCAGTACTCCGACAACTTTCTCGATGGATCTTCCAACAGCAGGTGGCTTCAATCCGCTGGCCTTCAGCACCTTCAATCCAATAACATTCCTCCGCTCCAGGACTATAACTTCTATGGCGGTGGAGCTCAAGGAGGAGGGAGAATGTACAGGAATGGGCAGAGGAGCTTCAATGGAGGAACTGAGTTCTACATGGAGCCTTCAACACCTCCTGGTAACTACCGTGCTTCCACGCAGAAGAAGAATGGCGACGATTCGCCCGGTGATTTCAGCCCCGGCCTGTTGGATCTGCATTCTTTTGACACTGAGCTTCTTCCTGAGATGCCAGCATCAAATGCATATGATGGCAACTCCCTGTATAAACCTGTCCGTTATAGAAGCTCTGATGATTCTGAACCTTATATGATGGGCAAACAGACTAACAGAGCTCGTGCCCCTGAAAGTGTCTTGAAAAGTTTAGCTGTTGACAAAGAAAAATCAAGTTCTGTAGCAAAGATCAAAGTTGTGGTTCGAAAGAGACCATTAAATAAGAAGGAATTAGCAAAGAATGAGGAAGACATTATAGACACATATTCCAATTCATTGACAGTGCATGAGACTAAACTGAAGGTTGACCTAACTCAGTACGTGGAGAAGCATGAATTTGTGTTTGATGCTGTCTTAAACGAAGAGGTTACAAATGATGAGGTGTATCGTGAAACAGTGGAGCCCATTGTTCCAATCATCTTTGAACGTACTAAAGCAACTTGCTTTGCATACGGGCAAACAGGAAGTGGAAAAACTTACACTATGAAGCCACTGCCACTTAAAGCATCCAGAGACATCTTGAGATTAATGTATCATACATATAGAAATCAAGGTTATCAATTGTTCGTGAGTTTCTTTGAAATCTATGGTGGGAAGCTTTTCGATCTCCTTAATGACCGAAAAAAACTTTGCATGAGGGAGGATGGTAAGCAGAAAGTTTGCATTGTGGGTTTGCAAGAGTACCGAGTTGTAGATGTAGAACAAATCAAGGAACTGATTGAAAAAGGAAATGCCACAAGAAGTACAGGCACCACAGGTGCAAACGAGGAATCTTCACGGTCACATGCAATACTTCAGCTTGCTATCAAGAGGTTAGTTGATGGCAATGAATCCAAACCTCCCCGCCCGGTTGGCAAGCTCTCGTTCATTGATCTTGCAGGAAGTGAACGTGGAGCAGATACCACAGATAATGACAAACAAACAAGAATAGAAGGTGCTGAGATCAATAAAAGCTTACTCGCCTTAAAGGAATGCATCAGAGCTCTTGATAATGATCAAGGGCACATCCCTTTCAGAGGCAGTAAACTGACTGAAGTTTTGAGGGATTCATTTGTTGGCAATTCCCGCACTGTTATGATATCGTGCATATCACCAAGCTCTGGTTCATGTGAACATACTTTAAATACATTAAGATATGCGGACAGGGTTAAGAGCCTGTCAAAAGGGAATAATTCCAAGAAAGATGTTTTATCTTCTAATATCAACCTCAAAGAATCAACCACGGTTCCATTGTCTTCTGTTGCTGCACCAGCCTATGAGGATCGCACAACTGAGGTATGGCAGGATGAAAATGATGGGGACGATTTCAGTCCTCCTGAAGATTACTACGAGGAGGTGAAACCATCATTGAAGAATAATGGAAAGGTGGAATCATATGCTACAACTGAAGACAAATTAAAGAAACCTAGTGGTCAGGTCAAATGGAAGGACCATCCAAGATCTGAACCTAAAGTGATGCATTCAGAGGATGATTTAAATGAACTATTACAGGAAGAAGAGGACCTTGTAAATGCTCACCGGACACAAGTAGAGGAGACCATGAATATTGTTAGAGAGGAGATGAACCTCTTGGTTGAAGCAGATCAACCAGGGAATCAGCTGGATGATTATATAACAAAACTGAATGTCATTCTTTCTCAGAAGGCTGCTGGCATCATGCAGTTACAGACTCGATTAGCGCATTTTCAGAAACGTTTAAAGGAGCATAATGTTTTGGTTTCATCTGCTGGTTACTAA 2094 0.4284 MNGERRQRSGAAGVHHQRQYSDNFLDGSSNSRWLQSAGLQHLQSNNIPPLQDYNFYGGGAQGGGRMYRNGQRSFNGGTEFYMEPSTPPGNYRASTQKKNGDDSPGDFSPGLLDLHSFDTELLPEMPASNAYDGNSLYKPVRYRSSDDSEPYMMGKQTNRARAPESVLKSLAVDKEKSSSVAKIKVVVRKRPLNKKELAKNEEDIIDTYSNSLTVHETKLKVDLTQYVEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFERTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMYHTYRNQGYQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQKVCIVGLQEYRVVDVEQIKELIEKGNATRSTGTTGANEESSRSHAILQLAIKRLVDGNESKPPRPVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNSKKDVLSSNINLKESTTVPLSSVAAPAYEDRTTEVWQDENDGDDFSPPEDYYEEVKPSLKNNGKVESYATTEDKLKKPSGQVKWKDHPRSEPKVMHSEDDLNELLQEEEDLVNAHRTQVEETMNIVREEMNLLVEADQPGNQLDDYITKLNVILSQKAAGIMQLQTRLAHFQKRLKEHNVLVSSAGY 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241686g00011 697 PRINTS Kinesin heavy chain signature 371 388 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc241686g00011 697 PRINTS Kinesin heavy chain signature 262 283 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc241686g00011 697 PRINTS Kinesin heavy chain signature 455 476 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc241686g00011 697 PRINTS Kinesin heavy chain signature 405 423 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc241686g00011 697 MobiDBLite consensus disorder prediction 577 606 - -
Stsc241686g00011 697 Coils Coil 608 628 - -
Stsc241686g00011 697 MobiDBLite consensus disorder prediction 1 29 - -
Stsc241686g00011 697 MobiDBLite consensus disorder prediction 572 606 - -
Stsc241686g00011 697 FunFam Kinesin-like protein 163 508 - -
Stsc241686g00011 697 ProSitePatterns Kinesin motor domain signature. 404 415 IPR019821 GO:0003777|GO:0005524|GO:0007018
Stsc241686g00011 697 CDD KISc_KIF2_like 182 503 - -
Stsc241686g00011 697 Pfam Kinesin motor domain 188 504 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc241686g00011 697 Gene3D Kinesin motor domain 158 508 IPR036961 -
Stsc241686g00011 697 MobiDBLite consensus disorder prediction 73 112 - -
Stsc241686g00011 697 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 505 IPR027417 -
Stsc241686g00011 697 ProSiteProfiles Kinesin motor domain profile. 182 505 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc241686g00011 697 PANTHER KINESIN-RELATED PROTEIN 6 563 692 IPR027640 GO:0003777|GO:0007018
Stsc241686g00011 697 SMART kinesin_4 180 511 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc241686g00011 697 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241686g00011 Stsc-Chr241686 34082 38343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241686g00011 182 505 Calmodulin-binding Proteins AT5G65930 33.234 9.83e-43 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241686g00011 K10393 - gmx:100810966 1204.5