Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241686g00009 ATGGATTTTTGGCCAGAATTTATTGCTAGCAATTCCGGTAAAGAATTTGTAGCAGGAGGCATTGGTGGCACCGCCGGTATAATCTCCGGTTACCCCTTGGACACCCTCCGAATCTTGCAGCAGCAGAATTCAAGAACCGGCTCCGCCGCCACCATCCTTCGAAACGTTGTCGCCAAGGAAGGACCAACTTCCCTCTACCGTGGCATGGCTGCACCTTTGGCTTCAGTATCTTTTCAGGTCCATTTTTCACAACCATTCCACAAATTACATATTCTGCACCATTACATCATTGTTTCTTTTATGATCATCTCCAATTACAAATGTAGTTACATGAACCACAACCGATGTTGA 351 0.4558 MDFWPEFIASNSGKEFVAGGIGGTAGIISGYPLDTLRILQQQNSRTGSAATILRNVVAKEGPTSLYRGMAAPLASVSFQVHFSQPFHKLHILHHYIIVSFMIISNYKCSYMNHNRC 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241686g00009 116 Gene3D Mitochondrial carrier domain 4 114 IPR023395 -
Stsc241686g00009 116 Pfam Mitochondrial carrier protein 13 79 IPR018108 -
Stsc241686g00009 116 SUPERFAMILY Mitochondrial carrier 13 81 IPR023395 -
Stsc241686g00009 116 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Stsc241686g00009 116 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 10 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241686g00009 Stsc-Chr241686 30967 31317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241686g00009 1 79 Antiporters AT1G79900 75.949 1.87e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241686g00009 K15109 - gmx:100801221 128.642