Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241686g00001 ATGCCGAAGAAGGTTCAGAAAACTCTTCAGGATTACCTTGCCAAGGTTAAGAGCCCTCGCCATTCATCACAAAACCACCAATCATCACAGAAACCGTTTAACTCCTTTTCATTTTCATCCTCCAAAAACTGGATCATCAAAGCCTGCAAACATCCAAGGACACCTTCTATTACCTTTGATGATTCCCATGGCGGCGGCGACAGCCACAAAGACGATGCGGCCACCCTGGCCGACGTTGATCGCTTCCTCTACGAGAATTTCAAGTCTCTGTATTTCAGAGAAGGTGAAGAAACCGAAGGCTACTACAACAACAAAGGAGGAGCTTCATCGGGAGAGATCCAACACGATCAAGGATCAAGCTCAAACTCGACCGTAACCAACACCGATTCATCTTCGAATGATGAGCATCATCATGAGAATGATGAGAAGCTCCCTGAGAATTGCATCGCTCTCTTGAGAAGCAGTTCGAGCCCGTACGAGGATTTCCGGCGCTCCATGCAGGACGTGGTGGAAGCTAGATTTAAAAGCCATGGGAAGGTAATCGATTGGGAGTTCATGGAGGAGCTATTGTTATCTTACCTTAACCTGAACGAGAAGAAGTCGCACAAGTTCATACTCAGTGCCTTCGTGGATGTAACCGCCGCCATGCGTCCGAATTCGGAAATGATGGCGGATCCCCATCCCCGGAGCGTTCGAACTGTTAGATTTGGAAGGGAAGGGGCCAAGAAGACCAAAGAATTTACCTTAGAATTTGGGTCCTCTAATTGA 768 0.4766 MPKKVQKTLQDYLAKVKSPRHSSQNHQSSQKPFNSFSFSSSKNWIIKACKHPRTPSITFDDSHGGGDSHKDDAATLADVDRFLYENFKSLYFREGEETEGYYNNKGGASSGEIQHDQGSSSNSTVTNTDSSSNDEHHHENDEKLPENCIALLRSSSSPYEDFRRSMQDVVEARFKSHGKVIDWEFMEELLLSYLNLNEKKSHKFILSAFVDVTAAMRPNSEMMADPHPRSVRTVRFGREGAKKTKEFTLEFGSSN 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241686g00001 255 MobiDBLite consensus disorder prediction 15 35 - -
Stsc241686g00001 255 Pfam Transcriptional repressor, ovate 155 215 IPR006458 -
Stsc241686g00001 255 MobiDBLite consensus disorder prediction 102 145 - -
Stsc241686g00001 255 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 24 215 IPR038933 GO:0045892
Stsc241686g00001 255 MobiDBLite consensus disorder prediction 131 145 - -
Stsc241686g00001 255 ProSiteProfiles OVATE domain profile. 151 215 IPR006458 -
Stsc241686g00001 255 MobiDBLite consensus disorder prediction 17 35 - -
Stsc241686g00001 255 MobiDBLite consensus disorder prediction 103 130 - -
Stsc241686g00001 255 NCBIfam uncharacterized plant-specific domain TIGR01568 149 216 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241686g00001 Stsc-Chr241686 8055 9212 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc241686g00001 Ovate 1.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241686g00001 - - adu:107459577 369.007