Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241685g00006 ATGGAATACAATCTAGGTCAAGGCAATGTTACTCCACCTGGGTCCATTGATAAGTCTAGGGTTTTGAATGTTAAGCCACTTAGAACTCTTGTTCCTGTGTTTCCTTCCCCTTCAAATCCCTCTTCCTCTTCAAATCCACAAGGTGGTGCACCCTTTGTTTGTGTTTCTCCTTCAGGTCCTTTCCCTTCTGGGGTGGCACCCTTCTACCCGTTCTTCATCTCCCCGGAGTCCCAGAGGCTATCTGAACAGAATGCACAAACCGCACAAACACCGACTCCTCAACGTGTGGGCCCAATATCAGCCGCAGTTCCAATTAATTCATTTAGGACACCAAACGGAGATGTTGGTTCATCACGAAAAAATAGCAGAGCTCGTGGACAGTTAACAGATGAAGATGCCTATGCTGAGGTGCAAGATGTTGATGCTGAAGATGGAACGGGGGAAGGGAGGCGCTCTAAACAGAAGAAACCAAGGGGACGGCGACCTAGCGGCAGCAGTGTAGTGGTTGATCTGGATCAAGCGGCTAATGATATTCTCAGTTCAATTAATCCTGTGGTTTTTGATGTTCTAAAACAACCTGATGGTAGTAGGGATGCAGTTACATATACACTTATGATATATGAAATTATGCGAAGAAAGCTTGGACAAGTTGAAGAGATATCAAGGGATATTGCTGGAGCAAAGCGGCCTGATCTGAAGGCTGGTAACATTATGATGACCAAGGGGATTAGGGCAAATAGCAAGAAACGTATTGGAGTTGTGCCCGGTGTTGAAATTGGGGATATTTTCTTTTTCAGATTCGAATTGTGCTTAGTTGGATTACACTCTCCATCTATGGCTGGAATTGATTACATTGGTTCCAAAACCAGTCAAGAGGAAGAAACACTAGCTGTTAGTATTGTCTCTTCTGGAGGATATGAGGATAATGCCGAGGACGGGGATGTGTTGATTTACAGTGGCCAAGGAGGGGTTAATCGGGATAAGGGAGCAAGTGACCAAAAGCTTGAAAGGGGTAATCTTGCACTGGAAAAGAGCTTGCATAAAGGTAATGAAGTGAGAGTAATTAAGGGTTTGAGGGATGAAGCACATCCAACTGGTAAGGTATATGTCTATGATGGCCTTTACAAGATCCAGGATTCGTGGGTAGAGAAAGCAAAATCTGGGTTCAATGTTTTCAAATATAAATTAGCTAGGGTGCCCGGGCAGCCTGCTGCATATATGATATGGAAATCCATTCAACAGTGGACTGATAAAACTGTTACAAGAACTGGAGTTATATTGCCTGATCTTACTTCCGGGGCAGAAAATCTACCTGTTTGTCTTGTGAATGATGTTGATAATGAGAAAGGCCCTGCGTATTTTACTTACTCCCCTTGTATCAAGAATTTGAAGCCAACTGCTCCTTTGGAATCTTCTGCTGGATGTTCTTGTACAGGTGGATGCCAAGCTACCAACCGTAACTGTCCTTGTATTCAAAAGAACGGAGGTTATCTCCCGTATTCTGCAAATGGGATGCTTGCTGATCTGAAGTCTGTGATATATGAGTGTGGTCCTTCCTGTCAGTGCCCTCCAAATTGCCGAAATCGGATCTCGCAAGCTGGCCTGAAATTTCGTTTGGAGGTGTTCAAGACGAAGGATAAAGGTTGGGGTCTAAGGTCTTGGGATCCTATTCGTGCAGGAACTTTCATATGCGAGTATGCTGGGGAAGTTATAGATAATGCTAGAGTGGATGAATTTAGCGGTGAAAATGATGATGATTACATTTTTGATTCTACTCGCATTTATCCGCAACTGGAAGTTTTCCCTGCTGATACTGAAGCTCCAAAGATTCCTTCCCCTCTTTATATATCAGCAAAAAATGAAGGGAATGTGGCTCGGTTTATGAATCACAGCTGCTCTCCAAATGTATTGTGGCGTCCAGTTCTACGGGAAAATAAGAATGAATCTGATCTTCACATTGCTTTCTATTCAATTAGACATATCCCTCCTATGATGGAATTAACTTATGATTATGGGACAGTTCTTCCTCTCAAAGGAGGCCAGAAGAAAAAGAAATGCTTTTGTGGGTCTGCAAAATGCAGGGGTTACTTTTGTTAG 2097 0.433 MEYNLGQGNVTPPGSIDKSRVLNVKPLRTLVPVFPSPSNPSSSSNPQGGAPFVCVSPSGPFPSGVAPFYPFFISPESQRLSEQNAQTAQTPTPQRVGPISAAVPINSFRTPNGDVGSSRKNSRARGQLTDEDAYAEVQDVDAEDGTGEGRRSKQKKPRGRRPSGSSVVVDLDQAANDILSSINPVVFDVLKQPDGSRDAVTYTLMIYEIMRRKLGQVEEISRDIAGAKRPDLKAGNIMMTKGIRANSKKRIGVVPGVEIGDIFFFRFELCLVGLHSPSMAGIDYIGSKTSQEEETLAVSIVSSGGYEDNAEDGDVLIYSGQGGVNRDKGASDQKLERGNLALEKSLHKGNEVRVIKGLRDEAHPTGKVYVYDGLYKIQDSWVEKAKSGFNVFKYKLARVPGQPAAYMIWKSIQQWTDKTVTRTGVILPDLTSGAENLPVCLVNDVDNEKGPAYFTYSPCIKNLKPTAPLESSAGCSCTGGCQATNRNCPCIQKNGGYLPYSANGMLADLKSVIYECGPSCQCPPNCRNRISQAGLKFRLEVFKTKDKGWGLRSWDPIRAGTFICEYAGEVIDNARVDEFSGENDDDYIFDSTRIYPQLEVFPADTEAPKIPSPLYISAKNEGNVARFMNHSCSPNVLWRPVLRENKNESDLHIAFYSIRHIPPMMELTYDYGTVLPLKGGQKKKKCFCGSAKCRGYFC 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241685g00006 698 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 100 697 IPR025794 GO:0016571
Stsc241685g00006 698 ProSiteProfiles Post-SET domain profile. 682 698 IPR003616 -
Stsc241685g00006 698 Gene3D - 234 419 IPR036987 -
Stsc241685g00006 698 MobiDBLite consensus disorder prediction 105 123 - -
Stsc241685g00006 698 MobiDBLite consensus disorder prediction 79 96 - -
Stsc241685g00006 698 ProSiteProfiles Pre-SET domain profile. 473 534 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Stsc241685g00006 698 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 124 691 - -
Stsc241685g00006 698 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 235 417 - -
Stsc241685g00006 698 SMART set_7 537 678 IPR001214 GO:0005515
Stsc241685g00006 698 SUPERFAMILY SET domain 413 678 IPR046341 -
Stsc241685g00006 698 ProSiteProfiles YDG domain profile. 252 398 IPR003105 -
Stsc241685g00006 698 Gene3D SET domain 420 697 IPR046341 -
Stsc241685g00006 698 SMART G9a_1 247 402 IPR003105 -
Stsc241685g00006 698 MobiDBLite consensus disorder prediction 1 21 - -
Stsc241685g00006 698 MobiDBLite consensus disorder prediction 1 16 - -
Stsc241685g00006 698 SUPERFAMILY PUA domain-like 234 417 IPR015947 -
Stsc241685g00006 698 Pfam Pre-SET motif 431 529 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Stsc241685g00006 698 SMART preset_2 427 521 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Stsc241685g00006 698 MobiDBLite consensus disorder prediction 79 166 - -
Stsc241685g00006 698 Pfam SAD/SRA domain 251 402 IPR003105 -
Stsc241685g00006 698 Pfam SET domain 548 672 IPR001214 GO:0005515
Stsc241685g00006 698 ProSiteProfiles SET domain profile. 537 672 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241685g00006 Stsc-Chr241685 34987 39535 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241685g00006 6 697 Su(var)3-9 homologs AT1G73100 48.732 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Stsc241685g00006 SAD_SRA 6.6e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241685g00006 K24405 - gmx:100805932 1132.09