Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc241684g00031 | ATGTCCTTAACCTACCTTTATTATGCTGATGATCCTCCAGCTGGAAAATCTGTGGTGGTCAAAGCACAATCTGAGAAGCCTGCAAAGAGAAAGAGGAAGAATCAGTATAGGGGAATCCGTCAGCGTCCTTGGGGGAAATGGGCGGCTGAGATCCGTGATCCAAGAAAGGGTGTTCGTGTCTGGCTAGGAACCTTCAACACTGCCGAAGAGGCTGCCAGAGCTTATGATGCTGAAGCACGGAGGATTCGTGGCAAGAAAGCCAAGGTGAATTTCCCTGAAGAGGCACCACGCACTCCTCCAAAACGTGCCAGGCCAAATCTGAACACTGTTCAGCCCAATCTGAGATATAGATTCAATGCTGGTAACGATGTGGAGAACTATGGTCCTCTAAATGTGGTTGAACAGAAACCACTGGTTAACCAGACTGCTAACATGGATTCCTTTCCTGAGGGTGGAAATAGTTTCGCATCCCTTACCTCACCTGATGATGTGACCCTTTACTTTGGTTCAGATCAGGGAAGTAATACATTTGATTATTCAGATCTTCATTGGGGTGAGGCCCCAAAGACTCCCGAGATCTCATCCATGCTTTCTGCTGCTTTGGAAGGGGAATCTCATTTTGTGCAAGATGCTAGCCAACAGAAAAATCTGCAGTCTAACTCACAGAATGTAGTACCTTTGAAAGATGATTCTGCAAGGACTCTGTCTGAGGAGCTTGTGGATATTGAATCTGATTTGAAATTCTTTCAGATGCCTTTTCTTGAAGGGAGCTGGGATGATACTTCATTGGAATCATTGCTAGCTGAAGACACCATTCAGGATGGGGGAAACCTGATGGACATGTGGAGCTTTGATGACATTCCTTCCATGGCTGGTGGAGTGTTCTGA | 888 | 0.4617 | MSLTYLYYADDPPAGKSVVVKAQSEKPAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPEEAPRTPPKRARPNLNTVQPNLRYRFNAGNDVENYGPLNVVEQKPLVNQTANMDSFPEGGNSFASLTSPDDVTLYFGSDQGSNTFDYSDLHWGEAPKTPEISSMLSAALEGESHFVQDASQQKNLQSNSQNVVPLKDDSARTLSEELVDIESDLKFFQMPFLEGSWDDTSLESLLAEDTIQDGGNLMDMWSFDDIPSMAGGVF | 295 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc241684g00031 | 295 | ProSiteProfiles | AP2/ERF domain profile. | 35 | 92 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc241684g00031 | 295 | FunFam | Ethylene-responsive transcription factor 2 | 34 | 93 | - | - | |
Stsc241684g00031 | 295 | Gene3D | AP2/ERF domain | 34 | 94 | IPR036955 | GO:0003700|GO:0006355 | |
Stsc241684g00031 | 295 | PRINTS | Ethylene responsive element binding protein signature | 58 | 74 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc241684g00031 | 295 | PRINTS | Ethylene responsive element binding protein signature | 36 | 47 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc241684g00031 | 295 | SUPERFAMILY | DNA-binding domain | 35 | 93 | IPR016177 | GO:0003677 | |
Stsc241684g00031 | 295 | CDD | AP2 | 35 | 93 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc241684g00031 | 295 | Pfam | AP2 domain | 35 | 84 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc241684g00031 | 295 | PANTHER | DNA-BINDING DOMAIN | 22 | 209 | IPR044808 | GO:0003700|GO:0009873 | |
Stsc241684g00031 | 295 | MobiDBLite | consensus disorder prediction | 18 | 39 | - | - | |
Stsc241684g00031 | 295 | SMART | rav1_2 | 35 | 98 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc241684g00031 | Stsc-Chr241684 | 159537 | 161434 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc241684g00031 | 14 | 295 | AP2-EREBP Transcription Factor Family | AT3G14230 | 43.506 | 2.53e-48 | 163 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Stsc241684g00031 | AP2 | 1.3e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc241684g00031 | K09286 | - | gmx:100810376 | 371.318 |