Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241684g00024 ATGTCTGGAGAAGCAGACCGGACTATGGCCATAGAGGAAGAGATAGAGACAGCGACGGCAACAACGGCGACGGAGAAAAACAATATGCTGAAAGACCGAAAGGTGTCATGGGCTAAGCTCCGCCGTATAGACTCCCTCAACTTAGAAGCTGGAAGAGTTTCTATGAGTGGAAACCATGGCTCTAAGGTGAATTGGAGGACAACGCTGAGTTTGGCATTTCAGAGTATAGGGATTGTTTATGGAGATATTGGGACATCACCGCTTTATGTGTATTCCAGCACCTTCACCAGTGGAATTAAGCACAACGATGATATTCTTGGAGTCTTATCCCTCATCATCTATACCATTGTGCTCATTCCTATGCTTAAGTATGTCTTCGTTGTGTTGTGGGCTAACGACAACGGCAACGGTGGAGCATTTGCACTGTATTCGCTGATATGCAGACACTTAAAGGTGAGTTTGATTCCAAATCAACAACCAGAGGATAAGGAACTTTCTAACTACAAACTGGAGACACCCTCTAGCCAGCTTAAACGAGCTCAAAGACTCAAGCAGATGCTTGAGAATAGTTATGCTGCTCGTATTCTTCTTTTGCTTGCAACCATAACTGGAACTTCCATGGTAATAGGAGACGGCATTCTTACTCCTTCTATTTCAGTCCTTTCTGCCGTAAGTGGGATCAGTACATCAATGGGTCAAGGAGCTGTAGTGGGAATCACAATAGTGATCCTAATTGGCCTATTTTGTTACCAACGATTTGGTACGGATAAAGTGGGATTCACGTTCGCACCAATTATTTTTGTGTGGTTTTCATTCATTGCTGGAATTGGTATCTACAATTTGTTCACACATGATATTGGAGTGTTGCGTGCTTTTAATCCAAAATACATAGTTGATTACTTCAAACGCAACGGTAAGCAAGCATGGTTATCACTTGGCGGAGTGTTCCTATGTATAACAGGATCTGAAGCCATGTTTGCAGACTTGGGTCACTTTAATGTACGAGCAATTCAAATGAGCTTCTCTTTCATTACATGTCCTTCAATATTGGCTGCATATATTGGGCAAGCAGCATATCTACGAAAGTTCCCTGAAAAAGTGTCCAATACTTTCTATGAAAGCATACCCCACGCCATATATTGGCCAACATTTGTGGTGGCTGTTGGCGCTGCTATCATAGCAAGCCAAGCAATGATTTCAGGAGCATTTTCCATCATATCTCAGGCCCTGAGTCTAGGTTGTTTCCCCCGAGTTAAGGTTGTGCACACTTCCACCAAGCACCAGGGTCAGGTCTATATCCCTGAGGTCAACTACATGTTCATGATTGCCTGCATCATTGTTTGTGCTGCCTTCAAGACCACAACAAAGATTAGTCGTGCATACGGGATTGCTGTTATTGGCGATATGATGATCACAACAACGTTGGTTTCATTGATAATGCTGGTTATATGGAAGAAGAGCATATGGCAAGTTGCTATCTTCTTTTTACTATTCGGCTCCACTGAGGCTCTCTATTTCTCATCTCAGATAACCAAGTTCACCGGTGGAGGCTTTCTCCCAATTGCCTCTGCTTTGTTCTTGACAACACTAATGGGAATCTGGCATTACGTCCACAAAGAAAGATACATGTTCGAGCTCAGAAACAAGGTTTCCAGCGAGTACATAAGGGAATTAGCCGCAGATCCAGACATAAGCCGAGTTCCTGGAATGGGGCTTCTCTACTCTGAGCTTGTTCAAGGGATTCCTCCTATTTTCCCTCATCTCATTGCAAGTGTCTCATCCATCCATTCTGTGCTTGTCTTTGTTTCCATCAAGGCCATCCCTGTCAGCAGAGTTGCCTTGGAAGAGAGGTTCCTGTTTCGCCACGTGGAGCCTCGAGAGTATCGAATGTTCCGGTGTGTTGTGAGACACGGTTACAACGATACACTCGAGGATCCTGTGGAGTTTGAATCACAATTGATACAAAATCTCAAGGCCTTCATTCAGCAAGATAGTTACATGATTACTGAGGGGGCTGATGTGGCACTCACAGAAGCAGAAGCAGAAGTGGAATCGCAAGAAGAAACTAAAGCAAGATATGCTAATTATTCGAGCAGAATAATTCCAAATAAAAACCAAGGCGGTGTGTCTCGTGCCTCATCAGATCCCATCGTGAACAAGTCGTCCAATACTTTCTCTTCGCTGCCGATCCAGGGTGCTGAAGATGAGGTCAAGTTCATCGAGAAAGCAATGGAAAAGGGTGTGGTGTATATGCTAGGAGAAGCAGAGGTGGTGGCTCAACCGAATTCATCTTTCCTGAATAAGATAGTTGTCAACTATGCTTACAGTTTCTTGAGAAAGAACTTTCGCCAAGGGGACAAATTGATGGCGATGCCTCGCAAGAGACTTCTCAAGATTGGAATGACATATGAAATATAA 2418 0.4384 MSGEADRTMAIEEEIETATATTATEKNNMLKDRKVSWAKLRRIDSLNLEAGRVSMSGNHGSKVNWRTTLSLAFQSIGIVYGDIGTSPLYVYSSTFTSGIKHNDDILGVLSLIIYTIVLIPMLKYVFVVLWANDNGNGGAFALYSLICRHLKVSLIPNQQPEDKELSNYKLETPSSQLKRAQRLKQMLENSYAARILLLLATITGTSMVIGDGILTPSISVLSAVSGISTSMGQGAVVGITIVILIGLFCYQRFGTDKVGFTFAPIIFVWFSFIAGIGIYNLFTHDIGVLRAFNPKYIVDYFKRNGKQAWLSLGGVFLCITGSEAMFADLGHFNVRAIQMSFSFITCPSILAAYIGQAAYLRKFPEKVSNTFYESIPHAIYWPTFVVAVGAAIIASQAMISGAFSIISQALSLGCFPRVKVVHTSTKHQGQVYIPEVNYMFMIACIIVCAAFKTTTKISRAYGIAVIGDMMITTTLVSLIMLVIWKKSIWQVAIFFLLFGSTEALYFSSQITKFTGGGFLPIASALFLTTLMGIWHYVHKERYMFELRNKVSSEYIRELAADPDISRVPGMGLLYSELVQGIPPIFPHLIASVSSIHSVLVFVSIKAIPVSRVALEERFLFRHVEPREYRMFRCVVRHGYNDTLEDPVEFESQLIQNLKAFIQQDSYMITEGADVALTEAEAEVESQEETKARYANYSSRIIPNKNQGGVSRASSDPIVNKSSNTFSSLPIQGAEDEVKFIEKAMEKGVVYMLGEAEVVAQPNSSFLNKIVVNYAYSFLRKNFRQGDKLMAMPRKRLLKIGMTYEI 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241684g00024 805 Coils Coil 676 696 - -
Stsc241684g00024 805 Pfam K+ potassium transporter 72 641 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc241684g00024 805 NCBIfam potassium uptake protein 71 805 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc241684g00024 805 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 62 804 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241684g00024 Stsc-Chr241684 118835 124113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241684g00024 28 805 Inorganic Solute Cotransporters AT4G13420 58.869 0.0 962
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241684g00024 K03549 - gmx:100814313 1191.41