Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241684g00011 ATGGTGGTACATGAGGGTTCAACAAGGGTGCTGCTTCTGCTTGTGTTCTTTACCATTAACTGCATTCTTCCTTGGATGTCCATTCCTGTCAATGGAAACACAGATCCGAATGATGCGGCTGCTATAAGGATTTTATTTCAATCTATGAACTCACCTTCCCAGCTAGGTTGGCAAGCAAATGGTGATGATCCGTGTGGACAACATTGGAAAGGCATAACATGCTCAAACAACCGAGTTACAGAAATTAAGTTATCTAATCTTGCACTCACGGGAACGGTGCCTTATGGATTACAACCCTTGACATCTTTGAACAACCTAGACCTGAGTAGCAACAATCTTGGAGGTGGCTTACCATACCAGCTTCCTCCAAATATGCAGCGCTTAAATCTGGCTCATAATAACTTTACTGGGACAATCCCTTACTCTTTTTCTCAGATGACCACTCTTACAGACCTGAATCTTGCTCACAATCAGTTCCAGCAAGGATTGAACGTTGACTTTCAAAGTCTTTCTGCCCTCTCTTCATTGGATGTCTCTTCCAATTTATTGACAGGTGACCTTCCGCAGACTTTGAGCTCACTTTCAGGCATTACCAGCATGTATCTGCAGAACAACCAGTTTACAGGCACTATAGATGTCCTTGCTAATCTGCCACTTGAAAATCTGAATGTGGAAAACAATAATTTTACCGGATGGATACCAGAACAGTTGAAAAGCATAAATTTAAAGACTGGTGGTAATTCATGGAGCACCGGACCTGCACCTCCACCTCCTCCTGGGACCCCACCATTACCTAAAAGCAATCGACACCACAGAACCGGTGGTGGAAGCACCTCTACCACCCCCTCAGATGCTGGCAGTAGCAGCAACACAGGTGACAATAGCAAAAAATCTGGTATTGGAGGTGGTGGCATAGCTGGAATTGTGATCTCCATAATTGTTGTTGGGGCAATATTAGCATTCTTTTTGGTGAAGAGAAAATCCAAGAAGTCATCCTCAGATTTAGAAAAACAGGACAATCAATCTTTTCCTCCTGTTCCCTCAAACGAATCCCACGAATTGAAATCTGTGCCACCTTCCTCTATAACTGAAATGAAGACATTTGATACTTCTGCATCAATAAATCTTAAACCCCCACCTATGGATCGTCATAAATCATTTGATGAGGATGAACTTTCAAAAAAACCTGCCATTATCAAGAAGACTGTAACAGCTCCTGCTAATGTGAAATCATACTCTATAGCTGATCTTCAGATTTCAACAGGAAGCTTCACTACTGATCACCTTGTTGGCGATGGGTCCTTTGGACGTGTTTACCGGGCTCAATTCGATGATGGAAAGGTTCTTGCAGTGAAGAAAATAGATTCATCTGTCCTTCCCAGTGACCTTTCTGAAGAATTTGCAGAAATAGTTTCAAACATCTCCCAGTTACATCATCCAAACGTGACAGAACTTGTAGGTTATTGCTCAGAGTATGGGCAGCACCTCTTAGTCTATGAGTTTCATAGAAATGGATCTCTGCATGACTTCCTTCATCTATCAGATGAATATAGCAAGCCATTGATATGGAATTCCCGTGTGAAGATAGCCTTGGGGACCGCGCGTGCTTTAGAGTACCTACATGAAGTTTGTTCACCATCAGTTGTACACAAGAATATTAAATCAGCCAACATACTGCTTGATGCAGAGCTTAATCCTCATCTTTCGGACAGCGGATTGGCAAGCTATATTCCAAACGCAGACCAGGTGTTGAATCAAAATGCTGGATCTGGATACGATGCACCTGAAGTTGCTTTGTCTGGTCAGTATACCATGAAAAGTGATGTCTACTGCTTTGGAGTTGTGATGTTGGAGCTTCTCACCGGACGTACACCATTTGATAGCTCAAGACCAAGACCTGAGCAGTCTCTAGTTCGTTGGGCAGCACCTCAACTCCATGATATTGATGCATTGACTAAAATGGTTGACCCTGCGCTGAAAGGGTTATATCCTGTTAAATCTTTGTCTCGATTTGCGGATGTTATTGCTCTCTGCGTTCAGCTGGAGCCTGAATTCCGACCACCAATGTCAGAAGTGGTTCAAGCATTAGTACGGTTGGTGCAGCGAGCTAACATGAGCAGACGAACTACTTTTGGATCTGATCATGGAGGATCCCATCGAGGGAGCGATGAACCCGCCATACACGATGTGTAA 2193 0.4341 MVVHEGSTRVLLLLVFFTINCILPWMSIPVNGNTDPNDAAAIRILFQSMNSPSQLGWQANGDDPCGQHWKGITCSNNRVTEIKLSNLALTGTVPYGLQPLTSLNNLDLSSNNLGGGLPYQLPPNMQRLNLAHNNFTGTIPYSFSQMTTLTDLNLAHNQFQQGLNVDFQSLSALSSLDVSSNLLTGDLPQTLSSLSGITSMYLQNNQFTGTIDVLANLPLENLNVENNNFTGWIPEQLKSINLKTGGNSWSTGPAPPPPPGTPPLPKSNRHHRTGGGSTSTTPSDAGSSSNTGDNSKKSGIGGGGIAGIVISIIVVGAILAFFLVKRKSKKSSSDLEKQDNQSFPPVPSNESHELKSVPPSSITEMKTFDTSASINLKPPPMDRHKSFDEDELSKKPAIIKKTVTAPANVKSYSIADLQISTGSFTTDHLVGDGSFGRVYRAQFDDGKVLAVKKIDSSVLPSDLSEEFAEIVSNISQLHHPNVTELVGYCSEYGQHLLVYEFHRNGSLHDFLHLSDEYSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDAELNPHLSDSGLASYIPNADQVLNQNAGSGYDAPEVALSGQYTMKSDVYCFGVVMLELLTGRTPFDSSRPRPEQSLVRWAAPQLHDIDALTKMVDPALKGLYPVKSLSRFADVIALCVQLEPEFRPPMSEVVQALVRLVQRANMSRRTTFGSDHGGSHRGSDEPAIHDV 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241684g00011 730 MobiDBLite consensus disorder prediction 330 390 - -
Stsc241684g00011 730 Gene3D Phosphorylase Kinase; domain 1 386 501 - -
Stsc241684g00011 730 MobiDBLite consensus disorder prediction 337 374 - -
Stsc241684g00011 730 ProSiteProfiles Protein kinase domain profile. 424 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241684g00011 730 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 35 260 - -
Stsc241684g00011 730 CDD STKc_IRAK 430 699 - -
Stsc241684g00011 730 ProSitePatterns Protein kinases ATP-binding region signature. 430 453 IPR017441 GO:0005524
Stsc241684g00011 730 MobiDBLite consensus disorder prediction 271 297 - -
Stsc241684g00011 730 Pfam Protein tyrosine and serine/threonine kinase 426 696 IPR001245 GO:0004672|GO:0006468
Stsc241684g00011 730 MobiDBLite consensus disorder prediction 251 265 - -
Stsc241684g00011 730 Pfam Leucine rich repeat 123 183 IPR001611 GO:0005515
Stsc241684g00011 730 MobiDBLite consensus disorder prediction 243 299 - -
Stsc241684g00011 730 MobiDBLite consensus disorder prediction 708 730 - -
Stsc241684g00011 730 SUPERFAMILY Protein kinase-like (PK-like) 406 696 IPR011009 -
Stsc241684g00011 730 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Stsc241684g00011 730 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 149 700 IPR046959 -
Stsc241684g00011 730 Gene3D Ribonuclease Inhibitor 35 257 IPR032675 -
Stsc241684g00011 730 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 388 501 - -
Stsc241684g00011 730 Gene3D Transferase(Phosphotransferase) domain 1 503 715 - -
Stsc241684g00011 730 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 502 710 - -
Stsc241684g00011 730 MobiDBLite consensus disorder prediction 713 730 - -
Stsc241684g00011 730 SUPERFAMILY L domain-like 35 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241684g00011 Stsc-Chr241684 71302 77082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241684g00011 13 709 Strubbelig Receptor Gene Family AT1G53730 65.767 0.0 839
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Stsc241684g00011 PK_Tyr_Ser-Thr 3.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241684g00011 - - gmx:100807707 1108.2