Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241684g00005 ATGCTGGGTGCTGCCGGCATCTTCATTCCAGAATTCCTAACAAAGATTGGCGTGCTCAACACGCCATCCTGGTATACTGCTGGAGAACAGGAGTACTTCACCGACACAACCACTCTCTTCATAGTTGAACTCATCTTCATTGGATGGGCTGAGGGCAGGAGATGGGCTGACATCATCAAGCCGGGGTGTGTAAACACCGACCCCATATTTCCAAACAACAAGCTCACTGGAACCGATGTTGGTTACCCCGGTGGCCTCTGGTTTGACCCTCTCGGGTGGGGCTCTGGCTCTCCTGAAAAGATCAAGGAATTGAGAACTAAGGAGATCAAGAATGGTAGGCTCGCCATGTTGGCTGTCATGGGAGCTTGGTTCCAGCACATCTACACCGGCACTGGTCCCATTGACAACCTCTTTGCTCACCTTGCTGATCCCGGCCATGCTACCGTTTTTGCTGCTTTCACCCCCAAGTGA 471 0.5223 MLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFIVELIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241684g00005 156 Pfam Chlorophyll A-B binding protein 1 126 IPR022796 -
Stsc241684g00005 156 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 154 IPR001344 GO:0009765|GO:0016020
Stsc241684g00005 156 SUPERFAMILY Chlorophyll a-b binding protein 1 154 - -
Stsc241684g00005 156 Gene3D Chlorophyll a/b binding protein domain 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241684g00005 Stsc-Chr241684 46450 47016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241684g00005 1 156 Chloroplast and Mitochondria Gene Families AT3G61470 94.231 4.30e-108 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241684g00005 K08908 - twl:120007857 332.798