Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241684g00003 ATGGATTTCGGAGTCGGAGGAGGAGCAAGGACCCGGGTGATCGGGGATTACATACTTGGACCCAGAATCGGGTCGGGTTCATTCGCGGTAGTGTGGCGCGCAAGGCACCGCCACTCCGGCATCGTGGTGGCTATTAAGGAGATCGACAAGAAGCAGCTCAGCCCCAAAGTGAGTGAGAATCTGTTTAAAGAGATTACTATTCTCAGCACCATCAATCATCCCAACATCATTCGTCTCTTGGAAGCTATCCAGACCACGGACAGGATTTACCTTGTGTTGGAGTATTGTAGTGGTGGCGACCTTGCTGCTTACATTCATCGCCATGGCAAAGTTTCTGAAGCCACTGCCAGGCACTTCATGATCCAATTGGGTAACCTCTTCTTGCTTTTCCCTTTATTATAA 402 0.4975 MDFGVGGGARTRVIGDYILGPRIGSGSFAVVWRARHRHSGIVVAIKEIDKKQLSPKVSENLFKEITILSTINHPNIIRLLEAIQTTDRIYLVLEYCSGGDLAAYIHRHGKVSEATARHFMIQLGNLFLLFPLL 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241684g00003 133 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Stsc241684g00003 133 FunFam Non-specific serine/threonine protein kinase 7 97 - -
Stsc241684g00003 133 Gene3D Transferase(Phosphotransferase) domain 1 9 126 - -
Stsc241684g00003 133 ProSiteProfiles Protein kinase domain profile. 17 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241684g00003 133 SMART serkin_6 17 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241684g00003 133 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 10 125 IPR045269 GO:0004674|GO:0006914
Stsc241684g00003 133 Pfam Protein kinase domain 20 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc241684g00003 133 SUPERFAMILY Protein kinase-like (PK-like) 13 123 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241684g00003 Stsc-Chr241684 3502 4378 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241684g00003 7 123 CBL-interacting serine-threonine protein kinases AT2G30360 37.815 5.26e-24 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Stsc241684g00003 Pkinase 2.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241684g00003 - K08269 qsa:O6P43_027452 197.978