Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241683g00019 ATGGGCAAGGACTATTGGTATTGGCCTACCTTCTCCTCCTCTTCTTCTTCCTCCTCCTCCAAGGCTTCTGCTACTTCTGGCTGCATGTCTGCACTCTTTCAAACCTTCGATTTCCATCCATTTCACTTTTCCACAAACCAACAACAACACAAGTCTCCCTCTTCCTCCTCCTCCTCTTCTTCTTCTACCATCTCCATCTCACAATATCTCTCCAAAGGTGCTGCTGCTGCTCCTCAAGAACCTACTACCAATACCTTCCAATCACACCATGCTACTTCCTCTTCAAAACAACAACACTTACAAATTCCGAAGAACATTATTCGAATCAAAACAAGCAGAAGCATATTGACAAGGACAAGATCAGGGAATTATTCAAGTGATGATTTCTCCTCCGAGATGAGCTTCTCTCCGGGAACCAAGACACCAACATTGGTTGCAAGATTGATGGGCCTTGATCTTCTTCCTGACAACAACAACAACAACAACAACTCTTCCTCTTCTTCCTCTTCTTCCACCCTCTCAACTCCAATACTAAATACCAACAACAACAATAATCCACAGCTTCATCACAACCCTAAAGCAAGGCAAAGGCATCATCATCAAATAATGAGGCACAGACACAGCACAGACAGCATTGGAACCATTCCTCGGTCCTTGTCTGAGGCTCCAAGGAGATCAGATGTTGAGCATAGTAGACTCTCTCTCCAAATCAACAAGGAGAACATTATTGGAGTTGATGATGACACCTACTTGGAAACTCCTCGCTTCTCATTTTCAAAGAGGAAATTTGATGAGAACAACAACAGTAATAGTAGCAGCAGAAGTCCAAGCCAGTATGCTAGGCAAATTGTGAAGCAGGTAAAGGAAAGTGTGAGCAGGAGAGTGGGAATAACTGACATAACCAACACTATCAAGAACAGAGACCAAGAATCTGTTGGCCCCCAAATCAGATTCAAGAAAGCTACAAGTAGTAATAATGAATCTTGCAGCCCGGGAAAGCAGTCTCCAAGAATCGGTAGATTCATTGACACCAAACACAGTAACAATAATAATAATAATAATAATAAGCAGTCAAACAGCATCACAAAACCATCACCATCACCATCACCACTTAAATCAAAAGATCAAAAGCCGTTACCATCGTCACCTACTACTACTACTCCACTACCTCCTGTTGCGAAGATTGAAACACAATTAAGCTCAAAAATAGATGATTTGCAGAGCAAAAAATCATCATCATCAGTTCCAAAAAGCAAGAGAAGCAGAACTACTACTACTAATACTGAGAAGTTGGGATCAGGGGTGAGTAGGGCCACTCCTCCACAGACATCATCAATAAGAAAGAAGCAACAGGAGTCGTTTATTGCATGTGCACTCTCGCCAACAAGACCCAAGGCCAAGAACAGATCAACTCATCCACTTTCAAGTAACCTTCTTCTCAATACAGCTCCAAATCTTCTTCCTCTCAAGACTCACCCTTCTCCTCTGCCAACTAAAATTCTTCAAAAACAGGCATGTGATACTGAAGAGCAAAAACTCAGCATCGCACAGTTATCAAGTTGTGCCTGCCAGAAGTACAAAAAACCAGCCACAGCGGCTACCACCACCACCGGAACCGGTACCGACGATGAAGGACCAGAATTTCAGTACATCAAAAGCATACTAAGCCGCATAGGGTTGGGAAAAGCCACATTACCCCACATCCAATACCAATGGTTCTCTCTTTCCCACCCATTAGACCCATCTCTCTTTCACTACCTGGAGATTCATCATTACCCATCATCCAATTCCGACAACTGGAGGGACCAGCTGGGTCCTCGCTGCAACCGGAGATTACTGTTCGACTTGGTGGATGAACTGCTGTCGGAGATTCTGGGAAGACCGAAACAGGCGCATGGGTTGTTGGTGGAGAGAGTGTGGAGGAAGGTTCGGAGGTTGCTGCCAGGTGCGAAGTGCGAGTTTCTAGAAGATATCGATGGGTTGATAGAGATGGAGGAGATGGAGAGGAAAGTGAAGGAGGAAAGAGAAGAAGGGTTGGTGATGGAAATTGGAAGGAGCATATTGGAGACGTTGGTGCATGAAACTGTTACCGGCTTCGTTAATGGTTTTGTCTGA 2115 0.4426 MGKDYWYWPTFSSSSSSSSSKASATSGCMSALFQTFDFHPFHFSTNQQQHKSPSSSSSSSSSTISISQYLSKGAAAAPQEPTTNTFQSHHATSSSKQQHLQIPKNIIRIKTSRSILTRTRSGNYSSDDFSSEMSFSPGTKTPTLVARLMGLDLLPDNNNNNNNSSSSSSSSTLSTPILNTNNNNNPQLHHNPKARQRHHHQIMRHRHSTDSIGTIPRSLSEAPRRSDVEHSRLSLQINKENIIGVDDDTYLETPRFSFSKRKFDENNNSNSSSRSPSQYARQIVKQVKESVSRRVGITDITNTIKNRDQESVGPQIRFKKATSSNNESCSPGKQSPRIGRFIDTKHSNNNNNNNNKQSNSITKPSPSPSPLKSKDQKPLPSSPTTTTPLPPVAKIETQLSSKIDDLQSKKSSSSVPKSKRSRTTTTNTEKLGSGVSRATPPQTSSIRKKQQESFIACALSPTRPKAKNRSTHPLSSNLLLNTAPNLLPLKTHPSPLPTKILQKQACDTEEQKLSIAQLSSCACQKYKKPATAATTTTGTGTDDEGPEFQYIKSILSRIGLGKATLPHIQYQWFSLSHPLDPSLFHYLEIHHYPSSNSDNWRDQLGPRCNRRLLFDLVDELLSEILGRPKQAHGLLVERVWRKVRRLLPGAKCEFLEDIDGLIEMEEMERKVKEEREEGLVMEIGRSILETLVHETVTGFVNGFV 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241683g00019 704 MobiDBLite consensus disorder prediction 306 333 - -
Stsc241683g00019 704 MobiDBLite consensus disorder prediction 154 190 - -
Stsc241683g00019 704 Pfam Domain of unknown function (DUF4378) 547 694 IPR025486 -
Stsc241683g00019 704 Pfam DUF761-associated sequence motif 130 158 IPR032795 -
Stsc241683g00019 704 MobiDBLite consensus disorder prediction 341 449 - -
Stsc241683g00019 704 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 700 - -
Stsc241683g00019 704 MobiDBLite consensus disorder prediction 118 231 - -
Stsc241683g00019 704 MobiDBLite consensus disorder prediction 191 205 - -
Stsc241683g00019 704 MobiDBLite consensus disorder prediction 118 141 - -
Stsc241683g00019 704 MobiDBLite consensus disorder prediction 306 449 - -
Stsc241683g00019 704 MobiDBLite consensus disorder prediction 70 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241683g00019 Stsc-Chr241683 134113 137101 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241683g00019 117 627 TRM (TON1 Recruiting Motif) Superfamily AT5G51850 30.784 2.38e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241683g00019 - - ahf:112711697 786.949