Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241683g00015 ATGGCTCTGGTCCCAGCAAAGTTCATATTCTTTCCAATCATTTTCTTTCTCTTGACCTCACTTTCACTATCCAAGGCTGAACTCCAACCAAATTACTATGACCAAACATGTCCACAGTTGGAGAAAATCATTGCAGACACTGTTCTCAATGCTTCAAAGCATGACCCCAAAGTCCCAGCTCGTATCTTGAGGATGTTCTTCCATGACTGTTTCATAAGGGGATGTGATGCATCAATACTTCTGGACTCAACCGCCACTAACAAAGCAGAAAAAGATGGCCCTCCGAATATCTCGGTTCGATCATTTTATGTGATCGATGATGCTAAGGCCAAGCTTGAGAAGGCTTGCCCACACATTGTTTCTTGTGCTGACATAATTGCCATTGCAGCTAGAGATGTTGTGGCCATGTCTGGAGGTCCATATTGGAAGGTACTTAAAGGAAGGAAAGATGGAAAGGTTTCAAAGGCATCTGATACCAGTGCCTTACCTGCACCGTTCTTCAATGTCAGCCAACTCATTCAAAGCTTTGCTAAGAGAGGTTTAGGAGTAAAAGACATGGTGACTTTATCTGGCGGCCACACCCTAGGCTTCTCACACTGTTCTTCCTTCGTAGCTCGCCTTCGCAATTTCAGTTCAGTGCATGACATTGATCCACGCCTGGACACTGAATTTGCGCTTGGCCTACGAAAGCAATGCCCAAAGCCAAGCAACAATGGTGATGCAGGGCAGTTCTTGGACTCAACAGCTTCTGTTTTTGATAATGATTATTACAGACAATTGTTGGCAGGAAAAGGTGTGTTCTCTTCGGACCAATCACTGGTTGACGATTCCAGGACTAGATGGATTGTTGAAGCATATGCCAGAGACCAGAGTTTGTTCTTCAAAGAGTTTGCATCTTCCATGGTGAAACTTGGAAATGTAAGAGGCTCTGGAGATGGAGAAGTAAGACTACATTGCAGGCTCAAGAACTAA 972 0.4434 MALVPAKFIFFPIIFFLLTSLSLSKAELQPNYYDQTCPQLEKIIADTVLNASKHDPKVPARILRMFFHDCFIRGCDASILLDSTATNKAEKDGPPNISVRSFYVIDDAKAKLEKACPHIVSCADIIAIAARDVVAMSGGPYWKVLKGRKDGKVSKASDTSALPAPFFNVSQLIQSFAKRGLGVKDMVTLSGGHTLGFSHCSSFVARLRNFSSVHDIDPRLDTEFALGLRKQCPKPSNNGDAGQFLDSTASVFDNDYYRQLLAGKGVFSSDQSLVDDSRTRWIVEAYARDQSLFFKEFASSMVKLGNVRGSGDGEVRLHCRLKN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241683g00015 323 PANTHER PEROXIDASE 25-RELATED 18 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241683g00015 323 Pfam Peroxidase 47 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241683g00015 323 Gene3D Peroxidase, domain 2 163 304 - -
Stsc241683g00015 323 ProSiteProfiles Plant heme peroxidase family profile. 27 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241683g00015 323 SUPERFAMILY Heme-dependent peroxidases 27 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc241683g00015 323 Gene3D - 31 323 - -
Stsc241683g00015 323 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241683g00015 323 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241683g00015 323 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241683g00015 323 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241683g00015 323 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241683g00015 323 FunFam Peroxidase 163 304 - -
Stsc241683g00015 323 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241683g00015 323 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241683g00015 323 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241683g00015 323 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241683g00015 323 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241683g00015 323 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241683g00015 323 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241683g00015 323 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241683g00015 323 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241683g00015 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Stsc241683g00015 323 FunFam Peroxidase 31 168 - -
Stsc241683g00015 323 CDD secretory_peroxidase 27 320 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241683g00015 Stsc-Chr241683 98296 99680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241683g00015 6 323 Peroxidase AT5G51890 68.339 1.78e-164 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241683g00015 K00430 - gmx:100799516 498.049