Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241683g00014 ATGGAAGCGAATCATGGCGGTTTCAGCGAAGACACTCAAAGCGCCGACGTATCAACATGTAAGACGACGCCAATAGCGAACACGCCTGAACCGACGTTCCCGGAGCCCGTACCGCCGTCTCCGGTGGCGGTGCCTATGAAAGAGGAGCTCGCGGACTGCGAGAAGAGCCTCGAGGAGCGTCTCCAGGTGGCGATTGTTCCAACGCCGGTGGCAAGGAGGCCGTCGAAGGACCGCCACACGAAGGTAGAGGGGCGCGGCCGGAGAATCCGGATGCCGGCGACGTGCGCCGCTAGGATCTTCCAGCTGACGCGGGAGCTAGGCCACAAGTCCGACGGGGAAACAATAAGGTGGCTGCTGGAGCAGGCTGAGCCGGCGATCATCGAGGCCACCGGCACAGGAACTGTCCCAGCGATCGCGGTTTCGGTTGGCGGCACACTGAAGATCCCAACGTCGTCGCCGGCGAATCCAGAGGGCGAAGAAGAGGCGTCAAGAAAACGAAGAAGAAGAGCATCGAACAGCGAGTTCATTGATGTGAACGAGGAGCAACAATCGTCATCAGTGTCTTCGGGTCTCGCACCAATCACACAAACCGCATACGGTCCTAGTTCTGGTGTTGGTGTTGGTGTTGGTGTTGGTGGTGGAATGGTTCCAATGTGGACTATTGGTGGCGGTGGCGGTGGTTCTAATGGTCCTTTTTTCATGTTCCCTAATGCTGCTGTTGCTTCTTCCGGGGATGGTGTTGTCAACCATCCTCAGTATTGGGCTATTCCAGCGAATGCGACGCCGTTTTTTAACGTTCAAGCTCGTCCTATTTCGGGGTTTGTTGCGGCTGAGCAATTAGGCCATGTGGTGGTGCAGCCCCCAACTTGTTTTTCTTCTAATGCTTCTGCTAACTCTTGTTCTACTTTTGCTCCTTCTTTGAGCTCTGGAAGCAGTAGTGCTATTAATGGCTCTACTGTTAGTGTTTCTACTTCTAGTGCTTCCGCCGCCACTCAGATGCTTAGGGATTTCTCTTTGGAGGTTTATGACAAGAAAGAGTTGCAATTCTTGGGTTCCTCCTCTTCTTCTTCTTCTTCATCTTCTTCTGCCGTTGCTGCAGCTAAGTCAGAACAGCAAACAACCCAGACTCAGAGTTCTAAGCCTTCAAATTGA 1152 0.5373 MEANHGGFSEDTQSADVSTCKTTPIANTPEPTFPEPVPPSPVAVPMKEELADCEKSLEERLQVAIVPTPVARRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEQAEPAIIEATGTGTVPAIAVSVGGTLKIPTSSPANPEGEEEASRKRRRRASNSEFIDVNEEQQSSSVSSGLAPITQTAYGPSSGVGVGVGVGGGMVPMWTIGGGGGGSNGPFFMFPNAAVASSGDGVVNHPQYWAIPANATPFFNVQARPISGFVAAEQLGHVVVQPPTCFSSNASANSCSTFAPSLSSGSSSAINGSTVSVSTSSASAATQMLRDFSLEVYDKKELQFLGSSSSSSSSSSSAVAAAKSEQQTTQTQSSKPSN 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241683g00014 383 MobiDBLite consensus disorder prediction 350 383 - -
Stsc241683g00014 383 MobiDBLite consensus disorder prediction 1 42 - -
Stsc241683g00014 383 Pfam TCP family transcription factor 75 172 IPR017887 -
Stsc241683g00014 383 MobiDBLite consensus disorder prediction 176 190 - -
Stsc241683g00014 383 MobiDBLite consensus disorder prediction 7 28 - -
Stsc241683g00014 383 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 66 346 IPR005333 GO:0003700
Stsc241683g00014 383 MobiDBLite consensus disorder prediction 145 190 - -
Stsc241683g00014 383 MobiDBLite consensus disorder prediction 158 175 - -
Stsc241683g00014 383 ProSiteProfiles TCP domain profile. 75 129 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241683g00014 Stsc-Chr241683 91537 93031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241683g00014 69 350 TCP Transcription Factor Family AT5G51910 51.042 2.65e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc241683g00014 TCP 8.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241683g00014 - - aip:107617519 486.108