Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241682g00017 ATGAAGCCCCAATCTGACAACCACTCTACAGAACCCAGGAATCTGGGCCATTCATCAAGTGCCAACTTCAGTGGAATCAATTTTGGTGAGGTTGAAGCCAAGCACCGAATGCTTTTGATCCAGTGGCTAAATAGTCTTCTTCCGACATTGAACTTACCGATAAATATCACGGACGATGAGTTAAGAGTATGCTTGAGCAATGGTACAATTTTATGCCAAGTAATGAATAAGCTACGACCTGGTTCTGTCAGTGAATTTGATGATTCTCCGTCAGCAAAGTCAGAGAATATTAACAGGTTCCTAAAAGCCATAGATGCATTGGGCATGCCCAAGTTTGAACTATCAGACCTAGAGAAGGGCCCTATGAAGAATGTTGTAGATTGTCTTTTAACACTTAGAGCGAAAAGTTTACAGAATGCTTGGGGAGACAATATTTCTATGACTAGTTCCAAAGTCAGATCAATCACAAGTTCACCTTCATCACATTCAAAGTTCCAAAGTGTTCTGCGTAGTCCAGTTATGGCCGAGCCATCGGCTGCTTTATTACACCATGTAGGTCATAAATTTCACGAAGTGTTTCAAATGAAACAGGGAAGCTATGCTGAACTTCCTGCTGCAAAAATCTCAGAACTGATGAAATCTACCAGTTTAAACAATGCTCCTACGCAATCGCTTTTGAGTGTTGTGAATGCTATTTTGGAAGAAAGTGTTGAAAGAAGAAATAGTGAAATACCTCATCGCGTGGCTGTCTTGTTGAGAAAAGTTGTCCAGGAAATTGAGCGGCGTATATCGACTCAAGCAGACCATTTAAGAACACAAAACAATCTTTTTAAGGCCCGTGAAGAAAAATATCAATCAAGAATTAGAGTACTTGAGGTGCTTGCTTCTGGAGCAAAGGATGAAAGTGAGGGTGCGGTTCGAAGCCCTATGCGGAAACAGCAACAGACTACAGTCATGCAACCAAAGGAATTGACAGAGGTGACTAAAATGGAAGAAAAGAAGGCATTTGAATCTATACATGGTGAAATGGCTAAAGAGGAGACAGAGAAGGAAGATAACCAAGAGTTGGAAGCAGAAATCAAGGGTGCTAAAGAAGAACTGAAAGAGAAGTCACAAGAATATGAGCATCAGTTGGAAACATTAAGTAATAAGGTTAGAGAGAATGAGGCCTCTTACGAGTCTAAATATCAAAAGTGGAACATGAAAGTTATCCAATTGCAGAAAGCTACAACCTTTCAGCTTAGTTCAATAAAGGTCTTGAAATTGTCTTCGGAAACTGTTAAGCAACATGTGCTTAATGAGCAAACATTTTATGCAGAAGAATTTAAGCGATTAGGTGTAAATCTTAAACCACTAGTAGACGCAGCTGAGAATTATCAGGTAGTTCTTGCAGAAAATAGAAAGCTGTTTAATGACATTCAAGAATTAAAAGGAAATATTAGAGTATATTGCAGAGTTAGACCATTTCTCCCAGGACAGAAGGAGAAACAATCTATTGTGGAAAACTATGCTGAAACTGAAATGGTTGTGGCAAATCCTGCCAAACCAGGGAAAGATGGCCTTAGAAATTTTAAGTTTAACAGGAGTGGTCCAAATGGTGCAACAGCTGAGACTTATGGTGTTAACTATCGAGCTTTGAATGACCTTTTCAGCATAGCAACTACCAGACAAAGCACCATTTCCTATGAAATTGGTGTTCAAGTGATTGAAATATACAATGAACAAGTGCGAGATTTTGGAGAAGTTATATTTGTTTCTTCTTCCTTACATGGTTTCCTTCATTTGCACACACTTGGGATATTGACTCACTCCCAACCAAATGGCTTAGCGGTACCTGATGCTAGCATGCAAATTGTAAAACAAACCTCAGATGTCATAAAGCTGATGGACATTGGCCTGAAAAATAGAGCCAAAAGTTCAACTTCCATGAACGAAAGAAGTAGCCGTTCTCACAGTGTGGTATCAATTAATGTCCGTGGTTTAGACAAGAAGACTGGTTCTATTCTTCAGGGCAATCTTCATTTGATTGATTTGGCTGGAAGCGAGAGGGTAGATCGGTCTGAAGTGACTGGCGATCGACTAAAGGAAGCACAACATATCAACAAATCGCTAGCTGCTCTTGGAGATGTCATTTTTGCTCTTGCTCAAAAGAATGCTCATGTGCCATACAGAAATAGCAAGCTTACTCAACTTCTGCAATCTTCTCTAGGTGGTCATGCAAAGACACTCATGTTGGTACAAATCAATTCAGATGTAAAGTCATATTCCGAATCTCTAAGTACTTTGAAGTTTGCTGAGAGAGTTTCTGGTGTTGAGCTAGGAGCTGCGAAAAGTTCCAAAGATGCTGGAAGGGATGTCAAAGAATTAATGGAGCAGGTGGCTTCTCTAAGGGACACTATTTTGACAAAAGATGCGGAGATTGAGAGGCTGCAATTACTTAAGGATCTGAAATCTTGA 2457 0.3985 MKPQSDNHSTEPRNLGHSSSANFSGINFGEVEAKHRMLLIQWLNSLLPTLNLPINITDDELRVCLSNGTILCQVMNKLRPGSVSEFDDSPSAKSENINRFLKAIDALGMPKFELSDLEKGPMKNVVDCLLTLRAKSLQNAWGDNISMTSSKVRSITSSPSSHSKFQSVLRSPVMAEPSAALLHHVGHKFHEVFQMKQGSYAELPAAKISELMKSTSLNNAPTQSLLSVVNAILEESVERRNSEIPHRVAVLLRKVVQEIERRISTQADHLRTQNNLFKAREEKYQSRIRVLEVLASGAKDESEGAVRSPMRKQQQTTVMQPKELTEVTKMEEKKAFESIHGEMAKEETEKEDNQELEAEIKGAKEELKEKSQEYEHQLETLSNKVRENEASYESKYQKWNMKVIQLQKATTFQLSSIKVLKLSSETVKQHVLNEQTFYAEEFKRLGVNLKPLVDAAENYQVVLAENRKLFNDIQELKGNIRVYCRVRPFLPGQKEKQSIVENYAETEMVVANPAKPGKDGLRNFKFNRSGPNGATAETYGVNYRALNDLFSIATTRQSTISYEIGVQVIEIYNEQVRDFGEVIFVSSSLHGFLHLHTLGILTHSQPNGLAVPDASMQIVKQTSDVIKLMDIGLKNRAKSSTSMNERSSRSHSVVSINVRGLDKKTGSILQGNLHLIDLAGSERVDRSEVTGDRLKEAQHINKSLAALGDVIFALAQKNAHVPYRNSKLTQLLQSSLGGHAKTLMLVQINSDVKSYSESLSTLKFAERVSGVELGAAKSSKDAGRDVKELMEQVASLRDTILTKDAEIERLQLLKDLKS 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241682g00017 818 PANTHER KINESIN-LIKE PROTEIN KLP-3 531 808 IPR027640 GO:0003777|GO:0007018
Stsc241682g00017 818 MobiDBLite consensus disorder prediction 299 318 - -
Stsc241682g00017 818 Pfam Kinesin motor domain 535 769 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc241682g00017 818 Gene3D Kinesin motor domain 534 813 IPR036961 -
Stsc241682g00017 818 Gene3D Kinesin motor domain 457 533 IPR036961 -
Stsc241682g00017 818 Pfam Microtubule binding 465 529 IPR031852 GO:0008017
Stsc241682g00017 818 ProSiteProfiles Kinesin motor domain profile. 529 771 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc241682g00017 818 ProSiteProfiles Calponin homology (CH) domain profile. 33 137 IPR001715 GO:0005515
Stsc241682g00017 818 PRINTS Kinesin heavy chain signature 672 690 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc241682g00017 818 PRINTS Kinesin heavy chain signature 641 658 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc241682g00017 818 PRINTS Kinesin heavy chain signature 721 742 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc241682g00017 818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 479 810 IPR027417 -
Stsc241682g00017 818 Gene3D - 31 139 IPR036872 -
Stsc241682g00017 818 SMART ch_5 35 135 IPR001715 GO:0005515
Stsc241682g00017 818 SUPERFAMILY Calponin-homology domain, CH-domain 34 133 IPR036872 -
Stsc241682g00017 818 FunFam Kinesin-related protein3 608 814 - -
Stsc241682g00017 818 Coils Coil 346 391 - -
Stsc241682g00017 818 Coils Coil 779 799 - -
Stsc241682g00017 818 Pfam Calponin homology (CH) domain 36 133 IPR001715 GO:0005515
Stsc241682g00017 818 SMART kinesin_4 477 779 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241682g00017 Stsc-Chr241682 174142 181287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241682g00017 364 771 Calmodulin-binding Proteins AT5G65930 31.486 5.27e-44 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241682g00017 K10406 - qsa:O6P43_008574 934.865