Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241682g00005 ATGGCTCATCAGCACCAATTCACAGAAGATTTTCAAAGCTTGATGATGAAACCTTCTTCCACTTCCTCCTCTTTTCCTTTCTTGGATATTGATCCAAGCATGGATCTCATAAACCAGTTCATAGGATTGAACACAACAACAAATCATCATCATCATATGAACATGTGTGATGATGATAATAACTTGTTTGGATCTCATCATCATCATGATCATCATGATTTTCCAGGAAACTTATTATTAGAAGAAAGTTTCAACAACAACAATGCATCATCATCAGTAGTAGTCCCAGTAATTTCTTCCCTTCTGAATTACCCATCAGAAAATGAAGAAATCCATGAAGGTAAAAAGAGAAAATCAATGATGGATAACAATAATTATAAAAATAATAATAATGTTCCAGCATCATCATCAGCAACAAGTTCAGGAAACTCAACCCCTGCAGCTTCTCATCACAGTGAAAGCAAGATTACTAAAAATAATAATGGGTGTGGTGGAAGAGGAAAGAGAGTGAAGAGCAATAAAACAGAAGAAGATGAGAAGAAACAAAAGAAGGAAGTGGTTCATGTTAGAAGAGGAAAAATCAATGAAAAATTAAGGTGCCTACAAAACATTGTCCCAGGATGTTACAAGACCATGGGCATGGCGGTTATGTTGGATGAAATCATAAACTATGTTCAATCCTTGCAGCATCAAGTAGAGTTCCTTTCTTTGAAGCTCACAGCAGCAAGTACATTTTATGACTTCAATTCAGAGACAGATGCTTTGGAAACAATGCAGAGAGCAAGGGCATCCGAGGCAAAAGAGTTAGGCAAGTATGGGAAAGAAGGGCATGGAGGAGTTTCTTGCTATCAACCAAATTGGCATCTTCTTTGA 873 0.3688 MAHQHQFTEDFQSLMMKPSSTSSSFPFLDIDPSMDLINQFIGLNTTTNHHHHMNMCDDDNNLFGSHHHHDHHDFPGNLLLEESFNNNNASSSVVVPVISSLLNYPSENEEIHEGKKRKSMMDNNNYKNNNNVPASSSATSSGNSTPAASHHSESKITKNNNGCGGRGKRVKSNKTEEDEKKQKKEVVHVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFYDFNSETDALETMQRARASEAKELGKYGKEGHGGVSCYQPNWHLL 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241682g00005 290 MobiDBLite consensus disorder prediction 123 161 - -
Stsc241682g00005 290 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 180 244 IPR036638 GO:0046983
Stsc241682g00005 290 Gene3D - 173 236 IPR036638 GO:0046983
Stsc241682g00005 290 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 102 255 IPR024097 GO:0006355
Stsc241682g00005 290 MobiDBLite consensus disorder prediction 109 185 - -
Stsc241682g00005 290 MobiDBLite consensus disorder prediction 169 185 - -
Stsc241682g00005 290 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 228 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241682g00005 Stsc-Chr241682 20155 21966 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241682g00005 22 289 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 40.351 8.31e-47 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241682g00005 - - adu:107490384 372.474