Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241681g00048 ATGACCAAAATGGAGGTTGTTTTCAACAACAAAAGCTTCATTCTCGTGTTTATTACCATTGCCTTGTGTATTGCTGTTACCACGGTGCATGGCCAAGGTACTCGCGTAGGGTTCTATGCCGCTACATGTCCAAAAGCCGAATCCATCGTCAAGTCCACCGTTCAATCCCATCTTAACTCCGATCCTACTTTGGCCGCTGGCTTACTCAGAATACACTTCCATGATTGCTTTGTTCAAGGTTGCGACGCATCTGTCCTCGTTACTGGCTCCAACACCGAGAGAACAGCATTTGCTAACCTCGGACTCAGAGGGTTCGAGGTCATTGACGATGCAAAGACACAACTCGAGACTGCATGCCCCGGAGTTGTGTCTTGCGCCGATATCGTTGCCCTGGCTGCTCGAGACTCCGTAGTCTTGAGTGGCGGATTGAGTTGGCAAGTGCCTACAGGACGTAGAGATGGTCGTGTCTCACAAGCTTCCGATGTTAACAACTTGCCTGCACCTTCGGATTCTGTTGATGTTCAGAAACAGAAGTTCGCAGCAAAAGGTCTCAACACTCAGGATCTCATCACCCTCGTTGGGGGACATACAATTGGTACAGCAGCATGCCAATTCTTCAGTAACAGATTGTACAACTTCAGCGGAAATGGTCCTGATCCTTCCATTGACTCTTCATTTCTTCCGCAGCTACAATCACTGTGTCCACAAAACAGTGGCGGTAGCACACGAGTTCCCTTGGATACCGGAAGCCAACTGAAGTTTGATACATCTTACTATGGTAATTTGAGGAATGGACGTGGAATTCTTCAGTCAGATGAGGCACTGTGGAATGATGCTTCTACAAAGGTGTTTGTGCAGAGATACTTAGGGTTAAGAGGGTTGCTTGGGTTGACATTTGGGGTTGAATTTGGAAAGTCTATGGTTAAGATGGGTAACATTGGGGTCAATACTGGTACTGATGGTGAAATTCGCAAGATTTGTTCTGCTTTTAACTAA 996 0.4679 MTKMEVVFNNKSFILVFITIALCIAVTTVHGQGTRVGFYAATCPKAESIVKSTVQSHLNSDPTLAAGLLRIHFHDCFVQGCDASVLVTGSNTERTAFANLGLRGFEVIDDAKTQLETACPGVVSCADIVALAARDSVVLSGGLSWQVPTGRRDGRVSQASDVNNLPAPSDSVDVQKQKFAAKGLNTQDLITLVGGHTIGTAACQFFSNRLYNFSGNGPDPSIDSSFLPQLQSLCPQNSGGSTRVPLDTGSQLKFDTSYYGNLRNGRGILQSDEALWNDASTKVFVQRYLGLRGLLGLTFGVEFGKSMVKMGNIGVNTGTDGEIRKICSAFN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241681g00048 331 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241681g00048 331 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241681g00048 331 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241681g00048 331 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241681g00048 331 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241681g00048 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Stsc241681g00048 331 Pfam Peroxidase 50 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc241681g00048 331 Gene3D - 37 331 - -
Stsc241681g00048 331 Gene3D Peroxidase, domain 2 166 310 - -
Stsc241681g00048 331 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241681g00048 331 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241681g00048 331 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241681g00048 331 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241681g00048 331 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241681g00048 331 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241681g00048 331 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241681g00048 331 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241681g00048 331 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241681g00048 331 SUPERFAMILY Heme-dependent peroxidases 35 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc241681g00048 331 CDD secretory_peroxidase 35 330 IPR033905 GO:0004601|GO:0042744
Stsc241681g00048 331 PANTHER PEROXIDASE 25-RELATED 21 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc241681g00048 331 FunFam Peroxidase 37 178 - -
Stsc241681g00048 331 FunFam Peroxidase 166 310 - -
Stsc241681g00048 331 Coils Coil 327 331 - -
Stsc241681g00048 331 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Stsc241681g00048 331 ProSiteProfiles Plant heme peroxidase family profile. 33 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241681g00048 Stsc-Chr241681 209895 211552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241681g00048 14 331 Peroxidase AT5G64120 61.468 3.04e-147 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241681g00048 K00430 - gmx:100820620 514.612