Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241681g00038 ATGGAATCTATTTTGAGCCTCAGCATGCCGATTCAGATGCAGTTGAAGTTGCCACTCTTCAAACCTCTCCACCGTCAATTCGCCACTTGCACGATTCAATCAGCACCGAAAGCCAAGCCACTAATCTTCCGCTTCAACCACTCGTCTCAGCTCCCTCTTCTACGCTGCGTTTCCAACTCAGCTGCTTCTGGTGGTGGTGCTGACATTCCCTCCGATGCTATTGTTCTCAACGTTGAGGGCATGATGTGCGACGGCTGTGCCAATAACGTGAGGAAGCTTCTAGAAAGTCGACCACAAGTGTCATCTGCTATTGTGAATCTAACCGCCGCCAAAGCAGTAGTCTCTGCCGTATCCGAAGAAAAAGGTTCCCCAAACTGGCAGAAGCAATTAGGAGAAGCACTTGCTCAGCATTTAACTAACTGCGGTTTCAATTCTACCTTTCAAGGCGAGTGA 453 0.4901 MESILSLSMPIQMQLKLPLFKPLHRQFATCTIQSAPKAKPLIFRFNHSSQLPLLRCVSNSAASGGGADIPSDAIVLNVEGMMCDGCANNVRKLLESRPQVSSAIVNLTAAKAVVSAVSEEKGSPNWQKQLGEALAQHLTNCGFNSTFQGE 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241681g00038 150 CDD HMA 75 143 IPR006121 GO:0046872
Stsc241681g00038 150 FunFam Copper-transporting ATPase PAA1, chloroplastic 72 147 - -
Stsc241681g00038 150 Gene3D - 72 149 - -
Stsc241681g00038 150 ProSitePatterns Heavy-metal-associated domain. 78 107 IPR017969 GO:0046872
Stsc241681g00038 150 ProSiteProfiles Heavy-metal-associated domain profile. 72 139 IPR006121 GO:0046872
Stsc241681g00038 150 SUPERFAMILY HMA, heavy metal-associated domain 74 119 IPR036163 GO:0046872
Stsc241681g00038 150 Pfam Heavy-metal-associated domain 75 121 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241681g00038 Stsc-Chr241681 174028 174748 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241681g00038 66 146 Primary Pumps ATPases AT4G33520 59.756 3.91e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241681g00038 - K17686 adu:107468605 245.358