Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241681g00037 ATGGCGGAGCGTCCTTCCTACGGATTGGGTCCCCGATTGGATTTTCAGCAATTACAATTTGAAGCCCAGCACCGATGGTTGAGACCTGCAGAAATATGTGAAATTCTTCGTAATTATCGAATGTTTCAAATCACATCGGAACCTCATAACAGGCCACCAAGTGGTTCACTGTTTCTATTTGATCGAAAGGTTTTGAGATACTTCAGGAAGGATGGGCATAATTGGAGAAAGAAAAAAGATGGAAAAACTGTGAAAGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGACGTGTTGCACTGCTACTATGCCCATGGTGAGGAAAATGAAAATTTTCAGAGGCGAAGCTATTGGATGCTTGAACCGGATATGATGCACATAGTATTTGTACATTATTTGGAAGTTAAGGGTAACAAGACAAATACTGGAGGAAATACAGATAGTTATGATGTATCGTCTGATTCCCAAAGGATCACTTCTCCATCGTCTGGCTTACCAACAAATTATAGCAATGTGCCTTCACTGAGTACAGATTCCATGAGTCCAACTAGCAGTTTGACATCTTTACGTGAAGATGCTGATTCTGAGGAGATTCACCAAGCAAGCTCCGGATTACACACATTACGTGAGTCACAACATATGCAGAATGGTCACCTGACAAACAAAGTTGATGCTGGTTCGAACGGTGATCGGGGACAGCCATCAATTTCTGGAGATTATATCCCACTTGTTCCGGGGGAAAGATTTGGAGGAAGTGATACTGCTTATATTGATATTCAGAAAGCACATAGCATGGCATCCTGGGACACTGTTCTGAAGCAATGCAATGCAGAATTGCAGAGTGATCCTTCTTTTATATCATTTTCTTCCATCCCATCAAGTTCGATGGGGAATGTTGTAGAACAAGAAAGCAATGACTTTTGTGATCTTTTAGGGAGCAAAAGTGGCCCCACTGAGGAAGCAGGGAGCTCACAACCTCTCCAATCAAATTGGCAGACTCCTTTTGAAGAAAGCTCAGGACGCTTGCCAAATTTCACCCAATCATTGAGTTTGGAATTTGGATCTGATTATATATCTGGTTTAATTGGGAATGAAACTCTTAATGCAAGTTCTGAAATTGATCCTCAACTGTTTAACTTTCATGGTGAGCCAAAAGAGCAGCATCTGCAGCAACACTATCCAGAACGGCATGCAGATGCACAATCTCAGTATGCACTTCAATCCAATTCTCCAAATAAAATTCTTGGTGAAGAAAGTCTCAACCATGCTTTCACAGCAAAGCGCACATTATTGGAGAGAGACGAGAGCCTGAAGAAGGTTGATAGCTTCTCTAGGTGGATTACCAAAACACTTGGTGAGGTGGATGATTTGAATATGCAGTCCTCAGCTGGTATTTCATGGGGTACAGATGAATCCGGGCATGTGATAGATGATTCTTCATTGAGCCCATCCCTTTCTCAGGACCAGCTGTTTAGCATAAACGAATTTTCACCCAAATGGGCTTATGCTGAAGTGGAAACTGAGGTGCTAATTGTTGGAACATTTTTGAAGTGTCAACCAGAGGTGTCAACCTCTAACTGGTCCTGTATGTTCGGGGAAGTGGAGGTCCCTGCTGAGGTTTTAGCTAATGGAATTCTGTGTTGCCAAGCTCCACCTCATAAGGCTGGACGGGTTCCTTTCTATGTAACATGTTCGAATAGATTAGCTTGCAGTGAAGTGCGCGAATTCGATTACAGAGAAGGCTTCTCTGGAAATGTAGAATTTGCAGATTTTTATAATAGTTCAACTGACAGACTACTGAATTTGCGATTGGACGAGTTTATTTCCTTAAAACCAGTGTGCTCTAAACAAAGCTTTGAAAACGATATTGAGAAAAGAGACAAAATTTTAAAGCTTATTTCCCTGAGAGAGGAAGAGGAATACTCAAGTAAAGAAGAGCAACACCTAGAATCTGATACATCCTCACAGAAGGCTAAGGAGCATTTGTTTCACAGGCAGATTAAGGAGAAGCTGTATTCATGGCTTCTTCACAAAGTAGCTGAAAGTGATAAAGGTCCTAATGTGTTAGATAAGGATGGGCAGGGTGTTTTACATTTAGCAGCTGCTCTTGGGTATGATTGGGCTATACAACCAATTTTAACTGCTGGAGGTGGTATCAACTTCCGTGATGTGAATGGATGGACAGCTCTACATTGGGCTGCATCCTGTGGCAGAGAACGGACGGTTGTCATCCTTGTCACCTTGGGCGCAAATTCTGGAGCATGGACAGATCCATCTCCAGCATTTCCTTCGGGTAGAACAGCTTCAGAGCTTGCCTCTACCAACGGGCACAAAGGAATCTCTGGTTTTCTTGGTGAATCTTTATTAACTAGTCATCTTGAAGCCCTCACAATGGATGATCAATATAAAGTTGGCAGGCAAGAAATTTCAGGAACAAAAGTAGTGCAGACAGTCTCAGAACGGACTGCTACTCCTGTGTTATACGGTGATATGCCAGATGATCCATGCCTTAAGGATTCCCTTACTGCTGTTCGTAATGCTACACAAGCTGCAGATCGTATACATCAGGTATTCAGAATGCAATCTTTTCAGAGGAAGCAGTTAAATCAACTAGCAGATGATGAGTTTGGATTGTCAGATCCGCGAGCTNNNNNNNNNNGGCTCTAA 2667 0.4222 MAERPSYGLGPRLDFQQLQFEAQHRWLRPAEICEILRNYRMFQITSEPHNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLEPDMMHIVFVHYLEVKGNKTNTGGNTDSYDVSSDSQRITSPSSGLPTNYSNVPSLSTDSMSPTSSLTSLREDADSEEIHQASSGLHTLRESQHMQNGHLTNKVDAGSNGDRGQPSISGDYIPLVPGERFGGSDTAYIDIQKAHSMASWDTVLKQCNAELQSDPSFISFSSIPSSSMGNVVEQESNDFCDLLGSKSGPTEEAGSSQPLQSNWQTPFEESSGRLPNFTQSLSLEFGSDYISGLIGNETLNASSEIDPQLFNFHGEPKEQHLQQHYPERHADAQSQYALQSNSPNKILGEESLNHAFTAKRTLLERDESLKKVDSFSRWITKTLGEVDDLNMQSSAGISWGTDESGHVIDDSSLSPSLSQDQLFSINEFSPKWAYAEVETEVLIVGTFLKCQPEVSTSNWSCMFGEVEVPAEVLANGILCCQAPPHKAGRVPFYVTCSNRLACSEVREFDYREGFSGNVEFADFYNSSTDRLLNLRLDEFISLKPVCSKQSFENDIEKRDKILKLISLREEEEYSSKEEQHLESDTSSQKAKEHLFHRQIKEKLYSWLLHKVAESDKGPNVLDKDGQGVLHLAAALGYDWAIQPILTAGGGINFRDVNGWTALHWAASCGRERTVVILVTLGANSGAWTDPSPAFPSGRTASELASTNGHKGISGFLGESLLTSHLEALTMDDQYKVGRQEISGTKVVQTVSERTATPVLYGDMPDDPCLKDSLTAVRNATQAADRIHQVFRMQSFQRKQLNQLADDEFGLSDPRAXXXXL 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241681g00037 888 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 884 - -
Stsc241681g00037 888 MobiDBLite consensus disorder prediction 317 342 - -
Stsc241681g00037 888 SUPERFAMILY E set domains 493 579 IPR014756 -
Stsc241681g00037 888 Gene3D - 631 812 IPR036770 -
Stsc241681g00037 888 FunFam Calmodulin-binding transcription activator 2 486 582 - -
Stsc241681g00037 888 ProSiteProfiles Ankyrin repeat profile. 692 724 IPR002110 GO:0005515
Stsc241681g00037 888 ProSiteProfiles Ankyrin repeat region circular profile. 725 751 - -
Stsc241681g00037 888 MobiDBLite consensus disorder prediction 140 244 - -
Stsc241681g00037 888 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Stsc241681g00037 888 ProSiteProfiles Ankyrin repeat profile. 725 757 IPR002110 GO:0005515
Stsc241681g00037 888 Pfam IPT/TIG domain 493 571 IPR002909 -
Stsc241681g00037 888 Pfam Ankyrin repeats (3 copies) 673 751 IPR002110 GO:0005515
Stsc241681g00037 888 SMART ANK_2a 692 721 IPR002110 GO:0005515
Stsc241681g00037 888 SMART ANK_2a 725 754 IPR002110 GO:0005515
Stsc241681g00037 888 MobiDBLite consensus disorder prediction 309 342 - -
Stsc241681g00037 888 SUPERFAMILY Ankyrin repeat 682 784 IPR036770 -
Stsc241681g00037 888 MobiDBLite consensus disorder prediction 140 189 - -
Stsc241681g00037 888 Gene3D Immunoglobulins 486 581 IPR013783 -
Stsc241681g00037 888 SMART CG_1_2 18 136 IPR005559 GO:0003677
Stsc241681g00037 888 MobiDBLite consensus disorder prediction 200 234 - -
Stsc241681g00037 888 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241681g00037 Stsc-Chr241681 160752 169197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241681g00037 1 883 CAMTA Transcription Factor Family AT5G64220 49.891 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241681g00037 K21596 - gmx:100818124 1270.37