Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241681g00036 ATGGATAATTTCTGTTGCTTCAACTCTGTCTCTCAGGTGGTTGGAGGTCGTTCTTCAGGTAGCTCCGGCAAGGGAAGGAGCCCTCAGTATGCAGTCAAGTATGGTTTCAGCCTAGTTAAAGGGAAAGCGAATCACCCCATGGAGGACTATCATGTGGCGAAATTTGTCCAGTCGAGAGGGCAAGAGCTAGGACTTTTCGCTATCTATGACGGACACTTGGGAGACACTGTTCCAGCATATTTACAAAAGCATCTGCTTTCTAATATCTTGAAGGAAGCGGACTTCTGGGATGATCCAAACAGTTCCATCATTAAGGCGTATGAGACAACGGATCAGGCCATTCTTTCTCACAACCCTGATCTAGGACGAGGCGGATCAACTGCAGTGACTGCAATTCTCATAAATAATCAGAAATTGTGGATAGCGAATGTCGGAGATTCAAGAGCAGTTCTGTCACGAGGAGGGCAGGCAATACAGATGACGGTAGATCACGAGCCCAATACCGAAAGGGGAATCATTGAGAACAAAGGCGGATTTGTCTCAAACATGCCAGGAGATGTTGCAAGAGTGAACGGGCAGCTTGCGGTGTCTCGAGCATTCGGAGACAGAAACCTCAAATCGCACTTGCGATCCGATCCGGACGTACAACATCGCGACGTTGACCAAGATACCGAGATTTTGATTCTTGCTAGTGATGGTCTTTGGAAGGTAATGGCAAACCAAGAAGCAGTGGATTTGGCGAAAAAGATCAAAGATCCTCAAAAGGCGGCGAAACAGCTAGTTGCTGAGGCATTGAACAGAGACAGTAAAGATGACATTTCATGCATTGTAGTTCGTTTCAAGTGA 846 0.4669 MDNFCCFNSVSQVVGGRSSGSSGKGRSPQYAVKYGFSLVKGKANHPMEDYHVAKFVQSRGQELGLFAIYDGHLGDTVPAYLQKHLLSNILKEADFWDDPNSSIIKAYETTDQAILSHNPDLGRGGSTAVTAILINNQKLWIANVGDSRAVLSRGGQAIQMTVDHEPNTERGIIENKGGFVSNMPGDVARVNGQLAVSRAFGDRNLKSHLRSDPDVQHRDVDQDTEILILASDGLWKVMANQEAVDLAKKIKDPQKAAKQLVAEALNRDSKDDISCIVVRFK 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241681g00036 281 CDD PP2Cc 32 280 IPR001932 -
Stsc241681g00036 281 SMART PP2C_SIG_2 44 280 IPR001932 -
Stsc241681g00036 281 PANTHER PROTEIN PHOSPHATASE 26 280 IPR015655 GO:0004722|GO:0006470
Stsc241681g00036 281 SMART PP2C_4 29 278 IPR001932 -
Stsc241681g00036 281 SUPERFAMILY PP2C-like 28 281 IPR036457 -
Stsc241681g00036 281 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Stsc241681g00036 281 FunFam Probable protein phosphatase 2C 39 24 281 - -
Stsc241681g00036 281 Gene3D - 29 281 IPR036457 -
Stsc241681g00036 281 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241681g00036 Stsc-Chr241681 155554 158839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241681g00036 1 281 PP2C-type Phosphatase Gene Family AT1G22280 70.383 1.80e-147 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241681g00036 K17506 - gmx:100801722 464.922