Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241681g00027 ATGAAAGTTCAATGGGTGAGTTCCATTTGCACTGGCAAGTTCTTCATGTTTGTGTTGCTACTTACTCTTCTGTTCATTGATAATGGAAGCTGCAGTGGTGACATTGTCAAAACCTTACCTGGTTTTCAAGGTCCCTTGCCTTTTAAGCTTGAAACCGGATATATAGGAGTGGAGTACACAGAACTGTTCTACTATTTTTTTGAATCAACAGGAAAACCCCAAATTGACCCTCTTATCCTTTACTTAATTGGAGGCCCTGGTTGTTCTGCTTTGAATGGAGTATTCTATCAAAGTGGTCCATTGGCTTTCAATGAGACAGACTATTCTGGAGGTTTACCACAGTTAATTCTAAGGGGACACACTTGGACAAAGTCAGCTAGTATCATATACCCTGATGTTCCTGTTGGTACTGGATACTCTTATGCTACCACACAACAAAGTTACTTGTTGTCTGACACTATAACAGTTAGGCACATCATGAAATTCTTGAGAAAGTGGTTGATTGAACACCCTAAATTCATCACCAATAGATTCTACATTGCCACAGATTCATACAGTGGAGTGTTTGCTCCAATTCTTGCACAACAAATATTAGATGATAATGCAGCTGGAATTCTGCCAAATATAGAGTTAATAGGATACATAAGTGGTTCCCCACACTGTGATGTAGCAAAACAGGTAAATGCAAAAGTACCTCTAGCTCACAATTTGGCACTCATATCAGACAAACTTTATGAGACAGCCAAAGAAAACTGCAATGGTTGGTACTATGATGTAGATATCTCAGATGCAAAATGTATGGAATCACTTGAACCAATTCATGAGTGCCTTACTGATATATATGAATCGAATGTCATAGAACCTGACTGTGCAGTAATATCACCAAAACCAGGTGATAATGAACTTGCCCGAAGAGCTCTCATGGAAGCCCAACAAGGCCAACGTTTTCTTCCAAAATCACTAAGACAAAAATCCTCTGACCAATGGCACTGCAAGATTTTTGCTTATTTGCTGTCTTACATATGGGCAAATGATAAGAGCGTTCAGGATGCTCTCCATGTTCGTGAGGGAACGTTTGATAGATGGACAAGATGCAACCTATCCTTGATTGAGGAATACATTGGGGATGTTGAAAATGCAGTTCCTTACCACAAGAATCTTACTACCACCGGCTTACAAATATTACTTTATACTGGCGATCATGACCTGGTGGTGCCTCATATAGCAACTGAAGATTGGGTGAGTTCCCTGAATATTACAGTTGATGATTCTTGGGCACCTTGGTTTGTTGAGGCTCAAGTTGCAGGGTACAAGGTCATATATTCTAATACAGGATATCGTTTAACCTATGCAACCCTTAAGGGAGCAGGTCACTCACCTACAGAATACCAAAATGAACGATGTTTCCAGATGTTTGAAAGGTGGATTCATTTCTATCCCCTCTAA 1446 0.399 MKVQWVSSICTGKFFMFVLLLTLLFIDNGSCSGDIVKTLPGFQGPLPFKLETGYIGVEYTELFYYFFESTGKPQIDPLILYLIGGPGCSALNGVFYQSGPLAFNETDYSGGLPQLILRGHTWTKSASIIYPDVPVGTGYSYATTQQSYLLSDTITVRHIMKFLRKWLIEHPKFITNRFYIATDSYSGVFAPILAQQILDDNAAGILPNIELIGYISGSPHCDVAKQVNAKVPLAHNLALISDKLYETAKENCNGWYYDVDISDAKCMESLEPIHECLTDIYESNVIEPDCAVISPKPGDNELARRALMEAQQGQRFLPKSLRQKSSDQWHCKIFAYLLSYIWANDKSVQDALHVREGTFDRWTRCNLSLIEEYIGDVENAVPYHKNLTTTGLQILLYTGDHDLVVPHIATEDWVSSLNITVDDSWAPWFVEAQVAGYKVIYSNTGYRLTYATLKGAGHSPTEYQNERCFQMFERWIHFYPL 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241681g00027 481 SUPERFAMILY alpha/beta-Hydrolases 36 477 IPR029058 -
Stsc241681g00027 481 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 464 IPR001563 GO:0004185|GO:0006508
Stsc241681g00027 481 FunFam Serine carboxypeptidase-like 19 30 296 - -
Stsc241681g00027 481 FunFam Carboxypeptidase 330 481 - -
Stsc241681g00027 481 Pfam Serine carboxypeptidase 40 477 IPR001563 GO:0004185|GO:0006508
Stsc241681g00027 481 Gene3D alpha/beta hydrolase 30 295 IPR029058 -
Stsc241681g00027 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Stsc241681g00027 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Stsc241681g00027 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Stsc241681g00027 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 448 461 IPR001563 GO:0004185|GO:0006508
Stsc241681g00027 481 Gene3D - 336 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241681g00027 Stsc-Chr241681 129022 132054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241681g00027 32 57 Calmodulin-binding Proteins AT2G22960 80.769 1.80e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241681g00027 K16296 - rcu:8276886 545.814