Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241681g00003 ATGGAAGGGGGGAATAGGGCGGAAGCGGAGCGGTGGCTGTACACGGCTAACAAGCTCCTGAGCGCACGTGACCTGCACGGGGCCCGGTCCTTCGCGATCAGGGCCCGCGAGTGTGACCCACGCTTCGAAGCCACGGACCTACTTCTCACCGTAATCGACACCCTCCTCGCCGGCGAGGCTAGGATCAACGACCTCGTTGACTGGTACAGCATTCTCCAGGTCATTCGCTTCTCACCTAATCTCGACTACATCGCCACCCAGTACCGCCGTCTCGCTGCATTTCTTGACCCGCACCGCAACCCTTTCGCCTTCTCCGGCTATGCTTTCTCCCTCGTCCACGACGCATGGTCCGTACTCTCTAACCCTTCCAAGAAAGCAATCTTCGATAACGAACTCAGGCTCCTCACCGAACCCCCTCCTCCTCTTCCCCCTCCGCCGCCACAACCCGCCCCTGTTCCCGTCGTCCCTCAAGGTATTCCGTTCTTGCAGCAGAGTCAAAATCTCAACAACCACCACAATAATCATAATCAAAGCCACGATTTGAACCAGAACCAGAACCACTTCATTCACAATCAGAATCAGAACCACTTCTTCCACCAGAATCATCATCATCATCATCAGCAGCAGCAGCAGCAACTAGAGGAGCAACGGCAACGGCAACAAGAAGAGCAAGAACAACGGCAACGGCAACAACAACAAGAACAACTGCAACAGCAGCAGCAGCAGCAGCTTCTTTCAGTGAGTAAAAACCCTAGTTCGATTGAAGCAACCAGGCTTGTGGTGGTTGAGGAGGAGGAGGAGAGGCCGAGTCAGGACAATGTGACTCAGCCGACTGAGCCAACGGAGCCAACTCGGCCAGCTAGGGCCACTGACTCGACTGAAACCGAGTTGAATGGAGCTTTCTGGACGGCGTGCCCATATTGTTACGGTTTGTTTGAGTATCCGAAGGTGTATGAGGAGTGTACCTTGCTGTGTCAGAGCTGCCGGAGGCCATTCCACGCGGTGTCGGTGAGGTCGCCGCCGGAGTTGACCGGGAAAGACGGGTTCTTGTCCTTCTGCAGTTGGGGATTCATGCCTGTAGGTTTTTCTGGTGATTTCAAGGATATAAGCGGTTCTGGTTCTCAATGGAACCCTTTCTCTGCTTTGGTTCCTTGTCCTCTCAAAGGTGCCGACAAAAGGAGCCATCTGAGAGGGCCTTGGACTTACTATGATGATGATATCGCCGCAGCGTTTGTCGAGCTTTCTGATGCTACGGAGGATGATTCTGATGATTGCGATTGGAGGAATATTAATGCTAATAAGAAGTCAGGGAAGAAGAGAAGAAGAAGGAATAGGAAGAGTTCTGCTGCTGCTACTGGCAATGGCAGGACACCAGTGGAAAGGCCTAGGAGAGGGGTTCATAACAATGCTGGCAATGCTGGTGTGGAAAATGGGGGAGCTGATGCCGGCTCTGCAGCTGTGGCCGGCGTAGCTAGGTCTGAATCCGGCAAGAAAGCTGCATTGGCAAGTTTGAGGAGGAGGGGTGCTGGTAACTTGGGGAAATTGGATCTCAATGTGGAGTTTAGCAATGATGTGGAGGAGACTGCCCACGGAGTGCGCGGAAGGGTGGCGAATGCCGGTGGGACGGGTAATGCAGAGGATAACATTGAAGGGATTGGGTTCTTTGAGGGGCTTGATGAGTTCCTTAGCAGCTTGCCTATTCTCAATGGTGTTCCAGATGATAAGGTTAAGGGTCATTAG 1740 0.5328 MEGGNRAEAERWLYTANKLLSARDLHGARSFAIRARECDPRFEATDLLLTVIDTLLAGEARINDLVDWYSILQVIRFSPNLDYIATQYRRLAAFLDPHRNPFAFSGYAFSLVHDAWSVLSNPSKKAIFDNELRLLTEPPPPLPPPPPQPAPVPVVPQGIPFLQQSQNLNNHHNNHNQSHDLNQNQNHFIHNQNQNHFFHQNHHHHHQQQQQQLEEQRQRQQEEQEQRQRQQQQEQLQQQQQQQLLSVSKNPSSIEATRLVVVEEEEERPSQDNVTQPTEPTEPTRPARATDSTETELNGAFWTACPYCYGLFEYPKVYEECTLLCQSCRRPFHAVSVRSPPELTGKDGFLSFCSWGFMPVGFSGDFKDISGSGSQWNPFSALVPCPLKGADKRSHLRGPWTYYDDDIAAAFVELSDATEDDSDDCDWRNINANKKSGKKRRRRNRKSSAAATGNGRTPVERPRRGVHNNAGNAGVENGGADAGSAAVAGVARSESGKKAALASLRRRGAGNLGKLDLNVEFSNDVEETAHGVRGRVANAGGTGNAEDNIEGIGFFEGLDEFLSSLPILNGVPDDKVKGH 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241681g00003 579 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 458 - -
Stsc241681g00003 579 MobiDBLite consensus disorder prediction 135 157 - -
Stsc241681g00003 579 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Stsc241681g00003 579 MobiDBLite consensus disorder prediction 136 156 - -
Stsc241681g00003 579 MobiDBLite consensus disorder prediction 261 294 - -
Stsc241681g00003 579 MobiDBLite consensus disorder prediction 207 229 - -
Stsc241681g00003 579 MobiDBLite consensus disorder prediction 273 294 - -
Stsc241681g00003 579 MobiDBLite consensus disorder prediction 200 233 - -
Stsc241681g00003 579 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Stsc241681g00003 579 SMART dnaj_3 66 124 IPR001623 -
Stsc241681g00003 579 MobiDBLite consensus disorder prediction 419 481 - -
Stsc241681g00003 579 Coils Coil 203 242 - -
Stsc241681g00003 579 Pfam DnaJ domain 67 129 IPR001623 -
Stsc241681g00003 579 Gene3D DnaJ domain 63 133 IPR036869 -
Stsc241681g00003 579 CDD DnaJ 67 121 IPR001623 -
Stsc241681g00003 579 SUPERFAMILY Chaperone J-domain 61 132 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241681g00003 Stsc-Chr241681 18604 20642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241681g00003 276 578 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 40.635 1.76e-57 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241681g00003 - - aip:107623843 512.686