Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc241680g00012 | ATGGCTGGTCCAACAACACCTACTTCTGCAGCTGGACAGGCATTACGTGTGGCGGCACCGCCGGCAACCGCGTCACCGCTATCCAACTCAGTAGACAGTCACTCACCGGAATACTACCCTCCAATCTCAACTCCCTCTCATAACAATTTAACAGGGCCTGTGCCTTCACTCGCCAACCTCCAGTTACTCCAGAATGTCAACCTGGAATTTAACAACTTCACCTCCGTCCCTGACGGCTGCTTTCATGGTCTATTCAGTTTGCAAGTCATCTCCATGAGCAGCAACTTCAACCTCGCGCCATGGACCTTCCTCACTAGTTTGGTTATGATTGATCACCAACACAGTAGTGTTCTAGACTCCATCTACTTTGACTTCACAAACATGGAGGGTAACTTGCCGGATATATTCCACTCCTTTCCCAGACTCCGTTATCTTGTTCTCCATGGCAACAACCTCACAGGGGTTCTTCCCAAATCTTTGGGGCAAACTTTAATTGCATACCTATCTCTTTCTAACCAGAAAGTAGGGTTTTCAGGCTCAATACATGTACTTTCCACCATGATCTACTTGCGAACCGTGGAACTTCAAAATAACAAGTTCACCGGTTCCATTCCTGACTTGTCAAATTCCCACTATTTGAATGGACTCAGGCTCGATAACAACTTCTTAACCGGTGTGGTTCCACCTTTTCTTGCGAGTCTTGAAAACTTGGAAATCCTTCTTTTGAATAACAACATGCTTAGGGGTCCAATACCTAACTTTGTCAGCCATTTCAAAGTCATCGGTTTATATCCAATCAATAGGTTGTGTCCAGTGTCTGACGGACTTTGTGATCAGATGATTTTGCTTGACATTGCAGAAGCCTATGGGAATCCAGTTCAGTTGACTGATTCATGGAAATGGGACAACCCTAATTGCCAAAACTGGAGCTCCATTTTATGCCGACTAGATGGGAAGGTGGTTGTTGTGGATATGGCAAGGCAAGGCTTAACAGGGACGATCTTGCCTGAGTTTGCTAATTTAACTGATTTGAAGGCTTTGAATTTGAGTGGAAATAATTTGACAGGTTCAATACCAGCAAGCTTGGTAACTTTGTCTCAACTTGAGACTCTGGATTTGTCTTATAACGATCTATCTGGAGAGGTCCCCATCTTTCCAACAAGAGTCAAGTTGAATATCACTGGTAATCCTTTCCTATACTTCCAACGACATCCAACATTCCCATTTGTTTGGGTTGCAGGTGCATTGGCAATAACAATCGTTGGTTTTCTAATGTTCATGGTGATTGTTTATAATCGAAAACGATGTGCTAGTTTGGTTACAAAAGGATTGTTCAAGAAAGCAAGAACGTATTCAGATGACAATGTTGAGAATTTCATGAAAAGATATAGTTCTTTGGTGCCAAAGCTCTACAGTTATAAAGAAATTAAAAAAATGACAAAGTCATTCCACCATAAAATAGGTCAGGGAGGATTCGGCATTGTCTACAAAGGATGCTTAGATGATGGTCGTCATGTGGCGGTAAAAGTAATAAGTGAATCAAAGGGAAGTGGAGAAGAATTTATGAACGAAGTCATTAGTATCAGTAGAACATCCCATGTCAATATAGTTTCACTTTTGGGATTTTGTTACGAGAAAAACAAAAGGGCACTTATATATGAATTTATGTTGAATGGTTCATTAGACAAGTTCATCCATCGAAAAGGATCTCCAAATACTAATTGCGATCTTGATTTGAACATATTATACAAAATCGCAATTGGTATTGCTCAAGGATTAGAATACTTACATAGAGGATGTAGCACGAGAATTGTTCATCTTGATATTAAACCTCAGAATATTCTTCTGGATGAATATTTTTGTTCAAAAATTTCTGATTTTGGATTAGCTATATTATGCAAAAGAAGAGAGAGTATAATATCTTTATTAGGGGCCAGAGGAACTATTGGATATATTGCTCCAGAAATTTTAACTCGAAGATATGGTGGAGTTTCTCACAAATCTGATGTTTACAGTTATGGTATGTTGATTCTTGAAATAATTGGAGGAAAAAATCATGAATATAGAAAATCACAGGCAAGTGAAATCTTTCTTCCAGAAATAATTTATGAAAATCTTGTACAAGATAACATTCGTTCAAGTCATTCTCCAATCATTGAAGAAGAAGCTGGGATATTAAAGAAGATGATCATGATAAGTCTTTGGTGCATACAAACGATCCCAACAAACCGGCCATGTATTAATAAAGTGATAGAGATGCTAGAAGGGCCACTAGAATTAGTGCCGTTTCCTCCAAAGCCCACCTCGTATTCTCCTAACATTGTTGCACCCTTACAATTTTTAGAAGTATCTTTTAAGAAAGTCAATTCCAACGCATCTTATTATCTCTTATGTTTGTATTAG | 2403 | 0.3916 | MAGPTTPTSAAGQALRVAAPPATASPLSNSVDSHSPEYYPPISTPSHNNLTGPVPSLANLQLLQNVNLEFNNFTSVPDGCFHGLFSLQVISMSSNFNLAPWTFLTSLVMIDHQHSSVLDSIYFDFTNMEGNLPDIFHSFPRLRYLVLHGNNLTGVLPKSLGQTLIAYLSLSNQKVGFSGSIHVLSTMIYLRTVELQNNKFTGSIPDLSNSHYLNGLRLDNNFLTGVVPPFLASLENLEILLLNNNMLRGPIPNFVSHFKVIGLYPINRLCPVSDGLCDQMILLDIAEAYGNPVQLTDSWKWDNPNCQNWSSILCRLDGKVVVVDMARQGLTGTILPEFANLTDLKALNLSGNNLTGSIPASLVTLSQLETLDLSYNDLSGEVPIFPTRVKLNITGNPFLYFQRHPTFPFVWVAGALAITIVGFLMFMVIVYNRKRCASLVTKGLFKKARTYSDDNVENFMKRYSSLVPKLYSYKEIKKMTKSFHHKIGQGGFGIVYKGCLDDGRHVAVKVISESKGSGEEFMNEVISISRTSHVNIVSLLGFCYEKNKRALIYEFMLNGSLDKFIHRKGSPNTNCDLDLNILYKIAIGIAQGLEYLHRGCSTRIVHLDIKPQNILLDEYFCSKISDFGLAILCKRRESIISLLGARGTIGYIAPEILTRRYGGVSHKSDVYSYGMLILEIIGGKNHEYRKSQASEIFLPEIIYENLVQDNIRSSHSPIIEEEAGILKKMIMISLWCIQTIPTNRPCINKVIEMLEGPLELVPFPPKPTSYSPNIVAPLQFLEVSFKKVNSNASYYLLCLY | 800 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc241680g00012 | 800 | SUPERFAMILY | L domain-like | 46 | 402 | - | - | |
Stsc241680g00012 | 800 | Pfam | Protein kinase domain | 484 | 751 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc241680g00012 | 800 | MobiDBLite | consensus disorder prediction | 23 | 45 | - | - | |
Stsc241680g00012 | 800 | Pfam | Leucine rich repeat | 338 | 378 | IPR001611 | GO:0005515 | |
Stsc241680g00012 | 800 | SUPERFAMILY | Protein kinase-like (PK-like) | 457 | 754 | IPR011009 | - | |
Stsc241680g00012 | 800 | SMART | LRR_typ_2 | 139 | 162 | IPR003591 | - | |
Stsc241680g00012 | 800 | SMART | LRR_typ_2 | 60 | 83 | IPR003591 | - | |
Stsc241680g00012 | 800 | SMART | LRR_typ_2 | 234 | 258 | IPR003591 | - | |
Stsc241680g00012 | 800 | SMART | LRR_typ_2 | 341 | 365 | IPR003591 | - | |
Stsc241680g00012 | 800 | ProSitePatterns | Protein kinases ATP-binding region signature. | 487 | 509 | IPR017441 | GO:0005524 | |
Stsc241680g00012 | 800 | PANTHER | OSJNBA0070M12.3 PROTEIN | 47 | 756 | - | - | |
Stsc241680g00012 | 800 | Gene3D | Transferase(Phosphotransferase) domain 1 | 556 | 760 | - | - | |
Stsc241680g00012 | 800 | Gene3D | Ribonuclease Inhibitor | 44 | 270 | IPR032675 | - | |
Stsc241680g00012 | 800 | FunFam | Leucine-rich repeat receptor-like kinase | 278 | 402 | - | - | |
Stsc241680g00012 | 800 | ProSiteProfiles | Protein kinase domain profile. | 481 | 764 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc241680g00012 | 800 | FunFam | PR5-like receptor kinase | 556 | 764 | - | - | |
Stsc241680g00012 | 800 | PRINTS | Leucine-rich repeat signature | 365 | 378 | - | - | |
Stsc241680g00012 | 800 | PRINTS | Leucine-rich repeat signature | 344 | 357 | - | - | |
Stsc241680g00012 | 800 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 604 | 616 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc241680g00012 | 800 | FunFam | Suppressor of npr1-1 constitutive 4 | 451 | 555 | - | - | |
Stsc241680g00012 | 800 | SMART | serkin_6 | 481 | 754 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc241680g00012 | 800 | Gene3D | Phosphorylase Kinase; domain 1 | 454 | 555 | - | - | |
Stsc241680g00012 | 800 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - | |
Stsc241680g00012 | 800 | Gene3D | Ribonuclease Inhibitor | 277 | 402 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc241680g00012 | Stsc-Chr241680 | 72842 | 75541 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc241680g00012 | 451 | 777 | Receptor kinase-like Gene Family | AT5G38280 | 56.928 | 2.09e-118 | 371 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Stsc241680g00012 | Pkinase | 7.2e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc241680g00012 | - | K00924 | aip:107635702 | 686.411 |