Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241680g00010 ATGTTTAGTCGAATGTATGGTGGAATTTCTCACAAGTCGGATGTATATAGTTATGGCATGCTAATTATTGAAATGATCGGAGGAAAAAAGAATCATGACACCCGAGAATCTCATAGCAGCGAATTGTACTTTCCTGATTGGATTTACAAGGATCTTGAGGAAGGTAATATTCATTCAAGGAGTTTGGCACATGAAGGAGAAGAAAATGATATAACAACGAAGATTACATTGGTGAGTCTATGGTGCATTCAAATAAATCCATCAAATAGACCATCAATGAGTAGAGTGGTAGAAATGTTAGAAGGACCACTTCAATCAATACCATATCCTCCTAAGCCTGTTCTGTCTTCTCCTACAAGACCTTCCTTACAATTTTCAGATGCATCTTATAGCAGTGGAGGATTCAACAACTCAAGAAGTGAATTCTTAGCTTCATCTAAGACAGAAGGTTAA 453 0.3687 MFSRMYGGISHKSDVYSYGMLIIEMIGGKKNHDTRESHSSELYFPDWIYKDLEEGNIHSRSLAHEGEENDITTKITLVSLWCIQINPSNRPSMSRVVEMLEGPLQSIPYPPKPVLSSPTRPSLQFSDASYSSGGFNNSRSEFLASSKTEG 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241680g00010 150 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 120 IPR045874 GO:0004672
Stsc241680g00010 150 SUPERFAMILY Protein kinase-like (PK-like) 6 129 IPR011009 -
Stsc241680g00010 150 MobiDBLite consensus disorder prediction 106 150 - -
Stsc241680g00010 150 Gene3D Transferase(Phosphotransferase) domain 1 3 109 - -
Stsc241680g00010 150 MobiDBLite consensus disorder prediction 118 150 - -
Stsc241680g00010 150 Pfam Protein tyrosine and serine/threonine kinase 8 100 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241680g00010 Stsc-Chr241680 64100 64846 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241680g00010 1 141 Receptor kinase-like Gene Family AT5G38280 48.299 1.65e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Stsc241680g00010 PK_Tyr_Ser-Thr 3.1e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241680g00010 - - aprc:113862598 195.667