Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241679g00035 ATGGCTGAGTTAATTCATAATCCAGATATCATGTCAAAAGCCAAAAAAGAAGTTGAAGAAGCCGTTGGAATTGGAAAGCCAGTAACAGAATCAGACATTGCAACACTCCCTTACCTGCAAGCAATTATAAAAGAAACCCTACGCTTGCACCCACCAGCACCACTCTTACTTCCTAGAAAAGCCAAGGTTTCTGTGCAACTCATCAATGGCTACACCATTCCAAAGGGTGCACACATCATGATCAATGAGTTTGCTATTGGCAGGGATCAAGAATCATGGGGAAATCCAACTCTGTTTTCACCAGAGAGGTTCATGGTGGGAACAAAGGTGATTGACATTAAGGGGAAGAATTTTCAGCTAACACCATTTGGAAGTGGTAGAAGAATATGTCCTGGGTTGCCATTGGCTATGAGGATGTTGCATTTGATGCTGGGATCTTTGATTAATACTTTTGATTGGAAGCTTGAAAATGGGATGAAGCCTAAAGAAATGAACATGGAGGATGTAATCGAAGGAAATGCCCTTAGAAAGAAAGATCCCTTGAGAGTTATTCCAATCAAAATTATTAATTAA 573 0.4014 MAELIHNPDIMSKAKKEVEEAVGIGKPVTESDIATLPYLQAIIKETLRLHPPAPLLLPRKAKVSVQLINGYTIPKGAHIMINEFAIGRDQESWGNPTLFSPERFMVGTKVIDIKGKNFQLTPFGSGRRICPGLPLAMRMLHLMLGSLINTFDWKLENGMKPKEMNMEDVIEGNALRKKDPLRVIPIKIIN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241679g00035 190 SUPERFAMILY Cytochrome P450 1 185 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241679g00035 190 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 187 - -
Stsc241679g00035 190 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241679g00035 190 PRINTS P450 superfamily signature 130 141 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241679g00035 190 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241679g00035 190 PRINTS P450 superfamily signature 121 130 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241679g00035 190 PRINTS E-class P450 group I signature 120 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241679g00035 190 PRINTS E-class P450 group I signature 82 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241679g00035 190 PRINTS E-class P450 group I signature 130 153 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241679g00035 190 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241679g00035 190 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 123 132 IPR017972 GO:0005506|GO:0016705
Stsc241679g00035 190 FunFam Predicted protein 1 183 - -
Stsc241679g00035 190 Gene3D Cytochrome P450 1 183 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc241679g00035 190 Pfam Cytochrome P450 2 166 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241679g00035 Stsc-Chr241679 191524 192158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241679g00035 1 187 Cytochrome P450 AT1G33720 50.802 9.36e-66 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241679g00035 - - qsu:111996205 247.284