Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241679g00021 ATGGCAACAAGTTCAAGTTCAAGTTCAAGCAATAAAGCCAAAGCCATAGGCATTGATCTTGGCACAACTTATAGCTGTGTGGCTGTGTGGCACAACAACCATGTTGAGATCATTCCAAACGAACAAGGCAACCGCACCACCGCTTCTTGCGTTTCATTCACTCACACTCAAAGATTACTAGGCGATGCAGCCATTAACCAACTCTCCTTGAACCCACACAACACTGTCTTCGATGCTAAACGTTTGATCGGTCGAACCTTCAACGATCGGTCAGTTCAGGAGGACATGAAGCTCTGGCCTTTTAAGGTTGTCCCTGATCCTAACAACAACAAGAAGCCAGCCATTCTTGTTGAATATAAGTGTGAAGAGAGACACCTTGCACCCGAAGAGGTCTCTGCCATGCTGCTCTTCAAGATGAAGGAGGTTGCTGAAGCTTATTTAGGTTATCCTGTCAAGAATGCAGTCATCACTGTCCCTGCTTACTTCAACAACTCTCAGAGACAAGCCACCAAAGACGCCGGAAAGATCGCCGGCCTTAACGTTATGAGGATCATAAGCGAGCCTACTGCTGCTGCCATTGCTTATGGCCTCGACAACAAGAGTTGGAGGGAAGGTGAGAGGCTGTAG 627 0.4737 MATSSSSSSSNKAKAIGIDLGTTYSCVAVWHNNHVEIIPNEQGNRTTASCVSFTHTQRLLGDAAINQLSLNPHNTVFDAKRLIGRTFNDRSVQEDMKLWPFKVVPDPNNNKKPAILVEYKCEERHLAPEEVSAMLLFKMKEVAEAYLGYPVKNAVITVPAYFNNSQRQATKDAGKIAGLNVMRIISEPTAAAIAYGLDNKSWREGERL 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241679g00021 208 FunFam heat shock 70 kDa protein-like 77 134 - -
Stsc241679g00021 208 ProSitePatterns Heat shock hsp70 proteins family signature 1. 18 25 IPR018181 -
Stsc241679g00021 208 Gene3D - 4 207 - -
Stsc241679g00021 208 Pfam Hsp70 protein 15 201 IPR013126 GO:0005524|GO:0140662
Stsc241679g00021 208 FunFam Heat shock protein 70 16 205 - -
Stsc241679g00021 208 PRINTS 70kDa heat shock protein signature 154 174 - -
Stsc241679g00021 208 PRINTS 70kDa heat shock protein signature 64 72 - -
Stsc241679g00021 208 PRINTS 70kDa heat shock protein signature 14 27 - -
Stsc241679g00021 208 PRINTS 70kDa heat shock protein signature 42 54 - -
Stsc241679g00021 208 PANTHER HEAT SHOCK PROTEIN 70KDA 15 199 IPR013126 GO:0005524|GO:0140662
Stsc241679g00021 208 SUPERFAMILY Actin-like ATPase domain 14 198 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241679g00021 Stsc-Chr241679 110873 111726 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241679g00021 1 207 Calmodulin-binding Proteins AT1G16030 69.082 5.70e-97 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241679g00021 K03283 - gmx:121173324 303.523