Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241677g00043 ATGGTGGGGAATAATCAACCGGAAAGGGAAAGGGAAAGGAATAAAGATTGGATTAAAGTTCTTATGAATAGCAATGGGCACTGTGATAATCATCCTGATCTTCGTTCTAAAGAGAAGAATTTTTTCTGTGTAGACTGTGCAGTTAGAATGTGTAAGAACTGTAAGGAAGCTCATTCCCTGCACAGAAGGTTTCAGATATACAAATATTCCTATCAGGATGTCTTCCGCCATTCCGAGCTGCAGAAGTACTTTGACTGCTCAAAAATACAGACTTACATATCCAACAATGAAAGGATTGTGCATCTCAAACCCCGACCTTCAACTAATAAACCTAAATCTGATCTAAGCCCTGATTCTAAATCAAAAGAATACAACTTTTCATCAAGAACAAAGCCTGGAGGTACATGTGAAGAATGTGGGAAGCACTTACAAGATGAGAGGAATCGCTTCTGCTCTATTACATGCAAGGTGTCAGTGCTTCCCTTGGAAGCCCAAAACCAAGATCACAATCAATGTTCACAAAGGAGTTCGGTAGAGTTTGCTAGTCAAAGTACTAGGTTCTTCAACACTCCAAAAGCAGAAGGTAGTGATTTTACTTTAGATAACCAGAATTCAGAACCAGAGTCATCTTTATCTGAAGCTGAGCCATATGGATGGGTTGATGTTGTTAATTACAGAAAGCGCCCAAGGAAAACAACCCCTCAAAGGCCTATTTTTGTTTTCATGTCATAA 732 0.3934 MVGNNQPERERERNKDWIKVLMNSNGHCDNHPDLRSKEKNFFCVDCAVRMCKNCKEAHSLHRRFQIYKYSYQDVFRHSELQKYFDCSKIQTYISNNERIVHLKPRPSTNKPKSDLSPDSKSKEYNFSSRTKPGGTCEECGKHLQDERNRFCSITCKVSVLPLEAQNQDHNQCSQRSSVEFASQSTRFFNTPKAEGSDFTLDNQNSEPESSLSEAEPYGWVDVVNYRKRPRKTTPQRPIFVFMS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241677g00043 243 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 236 - -
Stsc241677g00043 243 Pfam B-box zinc finger 24 63 IPR000315 GO:0008270
Stsc241677g00043 243 SMART bboxneu5 23 66 IPR000315 GO:0008270
Stsc241677g00043 243 MobiDBLite consensus disorder prediction 102 135 - -
Stsc241677g00043 243 MobiDBLite consensus disorder prediction 190 211 - -
Stsc241677g00043 243 Pfam PLATZ transcription factor 68 157 IPR006734 -
Stsc241677g00043 243 MobiDBLite consensus disorder prediction 109 132 - -
Stsc241677g00043 243 ProSiteProfiles Zinc finger B-box type profile. 23 66 IPR000315 GO:0008270
Stsc241677g00043 243 MobiDBLite consensus disorder prediction 190 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241677g00043 Stsc-Chr241677 159101 161462 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Stsc241677g00043 PLATZ 1.4e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241677g00043 - - gmx:100815813 345.895