Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241677g00038 ATGGGTGGCCAAGAACAAGCCATAAGCCTTGAACCAGAGAAGCAGAAGCTTCTCAATGAACACAGCGAGAAGCACTTCACCGCCGGGGAGATCGTCCGCGACATCATCATCGGAGTCTCTGACGGCCTCACCGTTCCATTCGCCCTCGCCGCTGGGCTCTCCGGCGCCAATGCCACGTCTTCCATCGTCCTCACTGCCGGCATCGCCGAAGTTGCCGCGGGCGCCATCTCCATGGGCCTCGGCGGGTATCTAGCGGCAAAAAGCGAAGCGGATCACTACAAAAGAGAATTAAAAAGGGAGCAAGATGAAATCATCGCTGTTCCCGATACCGAAGCGGCGGAGGTAGCAGAAATTCTGGCACAATACGGAATAGAGGCACATGAATATGGACCCGTCGTCAATGCTCTCAGAAAGAATCCTCAAGCATGGCTTGATTTCATGATGAAATTTGAGCTGGGACTAGAAAAGCCAGATCCAAGGAGAGCATTACACAGTGCAATGACCATTGCCATAGCTTACATATTGGGTGGCGTTGTTCCACTCATTCCTTACATGTTCATTCCGAACGCTGCTGAGGCTGTTGTCATATCAGTGGTTGTTACCTTATTTGCATTGCTCATCTTTGGCTATGCCAAGGGATATTTCACAGGCAACAGACCCTTCAGGAGTGCTTTCGAGACAACCCTAATTGGTGCCATTGCCTCTGCTGCTGCTTTTGGTCTCGCAAAGGCTTTTCACGCTTAG 744 0.5134 MGGQEQAISLEPEKQKLLNEHSEKHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANATSSIVLTAGIAEVAAGAISMGLGGYLAAKSEADHYKRELKREQDEIIAVPDTEAAEVAEILAQYGIEAHEYGPVVNALRKNPQAWLDFMMKFELGLEKPDPRRALHSAMTIAIAYILGGVVPLIPYMFIPNAAEAVVISVVVTLFALLIFGYAKGYFTGNRPFRSAFETTLIGAIASAAAFGLAKAFHA 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241677g00038 247 Coils Coil 83 103 - -
Stsc241677g00038 247 Pfam VIT family 32 242 IPR008217 GO:0005384|GO:0030026
Stsc241677g00038 247 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 16 245 IPR008217 GO:0005384|GO:0030026
Stsc241677g00038 247 CDD CCC1 11 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241677g00038 Stsc-Chr241677 141099 146373 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241677g00038 1 243 Nodulin-like Gene Family AT3G43660 24.082 5.87e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241677g00038 K22736 - gmx:100793585 397.127