Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241676g00034 ATGCATATTTTGAAAATTAAAGAATTTTCACTGCGCATTCAGAGTACACTTCATGATTGGGATGATAAACAGTGCTTGAAGCTTTTGAAGAATTGTCACAAGGCTATTCCCAATGATGGGAAGGTGATTGTGGTGGACAATATTCTTCCTAATGTGCCTGAACCAACTGCTAATGCCAAGAACGCATTTGGATTTGATGTTGTCATGATGACTCAAGCGTTCCGAGGAAAGGAACGAACCCGACAATATTTCATGGACTTGGCTAAAGGATCTGGATTCACTTCCATAACATTTGTGTGCTGTGTCTCTAGCTTATGGGTCATGGAGTTCTATAAGTAG 339 0.4012 MHILKIKEFSLRIQSTLHDWDDKQCLKLLKNCHKAIPNDGKVIVVDNILPNVPEPTANAKNAFGFDVVMMTQAFRGKERTRQYFMDLAKGSGFTSITFVCCVSSLWVMEFYK 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241676g00034 112 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 112 IPR016461 GO:0008168
Stsc241676g00034 112 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 15 110 IPR029063 -
Stsc241676g00034 112 PANTHER O-METHYLTRANSFERASE 14 111 IPR016461 GO:0008168
Stsc241676g00034 112 Gene3D Vaccinia Virus protein VP39 14 102 IPR029063 -
Stsc241676g00034 112 Pfam O-methyltransferase domain 13 93 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241676g00034 Stsc-Chr241676 248217 248773 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241676g00034 10 112 Monolignol Biosynthesis Gene Families AT1G21100 44.231 3.88e-25 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241676g00034 K13066 - aip:107606823 144.05