Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241676g00025 ATGCAAGTCTTTGATTATACAAAGATCGATGCTAGGTTTAACGAGGTTTTCAGCAAAGCAATGCACAATATCTCCAGTGTAACAATGAAGAGGATTCTTGACATCTACCAAGGCTTTGAGCACATCAATATACTAGTGGATGTTGGTTGTAATGTTGGAATAACTATGAAATTAATCACTTCCAAATACCCTCATATCCATGGCATCAATTTTGATTTGCCACATGTCATAGAACGTGTCCCTACCTACCCTGGTGTGGAGAAGGTGGGGGGAGATATGTTTGAAAGTGTTCCAAATGGAGATGCCATTTTAATAAAGCAAATACTCCATGATTGGGATGATGAAGACTGCTTGAAGATCTTAAAGAATTGTCACAAGGCGATTCCCAATGATGGAAAGGTGATTGTGGTGGACGCCATTCTTCCTAATGTGCCTGAGCCTACAGCTATTGCCAAGAACGCATTTAGATTTGATGTTGTCATGATGACTCAGATGCCAAGAGGAAAGGAACGAACCCAGCAAGATTTCATGGACTTGGCTAAAGGATCTGGATTCACTGCCATAAAATTTGTGTGTTGCCTCTCTTGCTTATGGGTCATGGAGTTCTATAAGTAA 615 0.4049 MQVFDYTKIDARFNEVFSKAMHNISSVTMKRILDIYQGFEHINILVDVGCNVGITMKLITSKYPHIHGINFDLPHVIERVPTYPGVEKVGGDMFESVPNGDAILIKQILHDWDDEDCLKILKNCHKAIPNDGKVIVVDAILPNVPEPTAIAKNAFRFDVVMMTQMPRGKERTQQDFMDLAKGSGFTAIKFVCCLSCLWVMEFYK 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241676g00025 204 PANTHER O-METHYLTRANSFERASE 4 202 IPR016461 GO:0008168
Stsc241676g00025 204 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 204 IPR016461 GO:0008168
Stsc241676g00025 204 Pfam O-methyltransferase domain 2 185 IPR001077 GO:0008171
Stsc241676g00025 204 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 202 IPR029063 -
Stsc241676g00025 204 Gene3D Vaccinia Virus protein VP39 14 193 IPR029063 -
Stsc241676g00025 204 Gene3D - 3 32 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241676g00025 Stsc-Chr241676 193796 194885 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241676g00025 1 192 Monolignol Biosynthesis Gene Families AT5G54160 54.688 3.17e-77 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241676g00025 K13066 - gmx:100789402 294.278