Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241675g00011 ATGGCTTCTCATCAACCAACTCATTTCCTTCCCTTATTTTCTGGTTGTAGCATCTGTTGGTTCAACACAATCTGCTATGTCTTATGCCTCAAACATTTCCCTTCGAACCGTTCACTCGCGCTTTCCCTAAGCATAAGCTTCAACGGTGTAACGGCAGCTTTGTACACTCTCATTGCCAATGCAATAGCCTCAAGTGATGACACTCTCTACCTTTTGCTCAATGCCGTTGTCCCTTTACTTATTGCCGTGGTGGTACTATTCCCAATCCTCCAACAGCCGCAGCCTCAGCCGAATTCGGCTGACATGATCCGGCGCGACTCGTTGGCTTTCCTCTGCCTTAACATCCTTGCACTTGTGACCGGCCTCTACCTCTTGATCCTGTATTCCCTCAGTTCCAACACAACCATCGCGCGTGTCATCCTAGTTGGCGCCGGATTTCTATTATTACTTTTCCTGTTCTTGCCTGTGATTGTGAATTCTAGAGAATGGTCTTGCCTAAATAGTGCTGCATTTTACCCGATTTTGAATTCGAGGTTCAATCTCATTAACCTTGGTGGTGGTGGCGACGATGATCATCTTCATAAAGAACTCATTGAGAATGAGGACAATTATTTAAAAGGAAGTAGTGCAGACATTGTAAGAGAGAAGTGTTGTTTTCATAATGTGTTGTTGAAAGATCAGCTTAAGGTTCTTGGAGAAGAGCATTCAACTAAAATGCTTATGCATAGTTGGGACTTTTGGATTTACTACATGGCTTATTTCTGCGGAGGAACGATTGGATTGGTTTATAGTAACAACTTGGGTCAAATTTCACAATCGTTGGGACACAATTCTCAGACCAATTCTCTCGTCACGCTTTACTCCACGTGTTCTTTCTTCGGTCGCCTACTCGCAGCTGCACCTGACTTCTTGAACGGGAAGATACACTTTGCAAGAACAGGATGGTTTGCAGCAGCACTAGTGCCAATGCCTATAGCATTCATTTTGCTCGCCCTAACCGGCAGCATCGAAGCATTGCACATAAGCACGAGCTTAATCGGCCTAAGTTCCGGGTTTATTTTCGCCGCAGCAGTTTCCATTACATCAGAGTTATTTGGTCCAAACAGTGTTGGAGTGAACCACAACATACTAATCACCAACATTCCAATAGGATCATGTCTTTATGGCCTTCTAGCAGCTCTGGTTTACGACTCGAACGCAGACAGCTCGAGTCCCGAGTCGATATGGCTGCGCAAGATGACAATGTGTATGGGGAGGAAGTGCTACCTTGAGACATTTTTATGGTGGAATTGCATCTCCACTGTAGGAATGGTTTCAAGTTTTGTGCTGTACTTTAGGACTAGGCATGCTTATGATGACAAATTTGGAAGAAATACAAATTGA 1383 0.4432 MASHQPTHFLPLFSGCSICWFNTICYVLCLKHFPSNRSLALSLSISFNGVTAALYTLIANAIASSDDTLYLLLNAVVPLLIAVVVLFPILQQPQPQPNSADMIRRDSLAFLCLNILALVTGLYLLILYSLSSNTTIARVILVGAGFLLLLFLFLPVIVNSREWSCLNSAAFYPILNSRFNLINLGGGGDDDHLHKELIENEDNYLKGSSADIVREKCCFHNVLLKDQLKVLGEEHSTKMLMHSWDFWIYYMAYFCGGTIGLVYSNNLGQISQSLGHNSQTNSLVTLYSTCSFFGRLLAAAPDFLNGKIHFARTGWFAAALVPMPIAFILLALTGSIEALHISTSLIGLSSGFIFAAAVSITSELFGPNSVGVNHNILITNIPIGSCLYGLLAALVYDSNADSSSPESIWLRKMTMCMGRKCYLETFLWWNCISTVGMVSSFVLYFRTRHAYDDKFGRNTN 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241675g00011 460 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 452 - -
Stsc241675g00011 460 Gene3D MFS general substrate transporter like domains 212 417 IPR036259 -
Stsc241675g00011 460 Pfam Nodulin-like 13 158 IPR010658 -
Stsc241675g00011 460 SUPERFAMILY MFS general substrate transporter 12 449 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241675g00011 Stsc-Chr241675 51976 57619 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241675g00011 12 451 Nodulin-like Gene Family AT1G31470 51.011 3.27e-130 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241675g00011 - - gmx:100813947 580.096