Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241674g00005 ATGGATTGTGTGAAGATGCTGAAGAACAAAGGATACAGCAAAGTAGAAGAAGAGAATCAGAGTAACCACATCCAAGATCAACAAAAAAATTATTATTATTTCAAGTCCTTAATCGTTACTCTCTCCACCCTCGCTTTCCTCTTTCTCACTCTCCTCTTCGTCGTCGCCCTCGCCGACGTCCACCACAAGCCCCCCGAGTCAGCCACCGAGTCCATCCGAGTCGCCTGCAACGTCACTCGCTATCCCAACACCTGCTTTACAAGCTTAACCTCCTTCCTCACCAACACCACCAAAGCCATGGATCCACAAGGTATCTTGTCCCTCTCCCTCCGAGTCTCCATCCACGAGCTCTCTAATCTCGCCTCCTCCTCCTCCCTCTCCGTTGACTGCAGGGAGCTCGTGGATGACGCCATCTCCCGCCTCAACGACTCCCTCTCCAAGGTGGTGAAGGCGTCAGCAAAGGAGCTGACGGAGATAGAGATGGCGGACGCGCGCACTTGGGTGAGCGCCGCCTTGACCGACCAGCAGACGTGCCTTGACGGACTGGAGGAGATGGGGTCCTCCAACGCTACGGATGTGAAGACCAAGATTGACAGGTGCGGTGAGTACACCAGCAACGCCTTGGCCATTCTTGCCAATATTAAAGTCTTAGCTTGA 657 0.5358 MDCVKMLKNKGYSKVEEENQSNHIQDQQKNYYYFKSLIVTLSTLAFLFLTLLFVVALADVHHKPPESATESIRVACNVTRYPNTCFTSLTSFLTNTTKAMDPQGILSLSLRVSIHELSNLASSSSLSVDCRELVDDAISRLNDSLSKVVKASAKELTEIEMADARTWVSAALTDQQTCLDGLEEMGSSNATDVKTKIDRCGEYTSNALAILANIKVLA 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241674g00005 218 PANTHER PECTINESTERASE INHIBITOR-LIKE 46 210 - -
Stsc241674g00005 218 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 71 213 IPR035513 -
Stsc241674g00005 218 CDD PMEI-like_3 75 214 - -
Stsc241674g00005 218 NCBIfam pectinesterase inhibitor domain 46 213 IPR006501 GO:0004857
Stsc241674g00005 218 Gene3D Invertase/pectin methylesterase inhibitor family protein 67 215 IPR035513 -
Stsc241674g00005 218 SMART PMEI_2 67 210 IPR006501 GO:0004857
Stsc241674g00005 218 Pfam Plant invertase/pectin methylesterase inhibitor 71 210 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241674g00005 Stsc-Chr241674 21857 22513 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241674g00005 64 214 Carbohydrate Esterase AT1G53840 33.714 1.69e-23 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241674g00005 - - aip:107619071 300.056