Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241673g00031 ATGGCTAAACCCAAGGCTCCACGCCGAACCCTAGACACATACACAGTCAAACACATTAACAAAACCGTTAGAGCCGGGGATTGCGTGCTCATGCGCCCCTCTGATCCATCCAAACCGTCGTACGTGGCCAGGATCGAGCGGATCGAAGCTGACTCCCGAGGGGCCAACGTGAAGCTGCACGTCCGCTGGTACTACCGCCCGGAGGAGTCAATCGGTGGGCGCCGCCAGTTCCATGGCTCCAAGGAGGTTTTCCTCTCCGATCACTTCGATCTTCAGAGCGCCGACACCATCGAAGCCAAGTGTACGGTCCACAGCTTCAAGAGCTACACCAAGCTCGATGCTGTTGGAAGCGACGATTTCTTCTGTCGTTTCGAGTACAATTCCTCCACCGGCGCCTTCAATCCTGACAGAGTTGCTGTGTATTGTAAATGTGAGATGCCCTACAACCCTGATGACCTAATGGTCCAGTGTGAGGGCTGCAGTGATTGGTAA 492 0.5488 MAKPKAPRRTLDTYTVKHINKTVRAGDCVLMRPSDPSKPSYVARIERIEADSRGANVKLHVRWYYRPEESIGGRRQFHGSKEVFLSDHFDLQSADTIEAKCTVHSFKSYTKLDAVGSDDFFCRFEYNSSTGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCSDW 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241673g00031 163 ProSiteProfiles BAH domain profile. 21 137 IPR001025 GO:0003682
Stsc241673g00031 163 SMART BAH_4 21 137 IPR001025 GO:0003682
Stsc241673g00031 163 SUPERFAMILY FYVE/PHD zinc finger 130 163 IPR011011 -
Stsc241673g00031 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 136 163 IPR013083 -
Stsc241673g00031 163 Gene3D - 2 135 IPR043151 -
Stsc241673g00031 163 Pfam BAH domain 22 136 IPR001025 GO:0003682
Stsc241673g00031 163 PANTHER OS08G0421900 PROTEIN 5 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241673g00031 Stsc-Chr241673 167396 169139 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc241673g00031 41 139 Core DNA Replication Machinery Family AT4G14700 30.303 3.41e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241673g00031 K25868 - gmx:100787968 334.724