Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc241672g00029 ATGGTCGTTCTCTCCGATTGGATTGACCTCGCCCAAGCTTATACGCCATTCCCTGCTGGAAACATATTGTTCTGGACAAGACCTAAAGCCCAGAACTTGGCAGCCCAATACTTCGGAGGTTACCTAGAAGCCAAAATGTTAAGGGGCAACAGTTATGGAATTCTATCAATAATGCATAATGATAACTCTTCAGCATCAATGCATACCACTAAGGTGGCCCTCCCGGCACCCCCCGTCCACTCCTCCGACGAAGCTTTACACAGATTCCGGCGAGGGGACTCAGGAGCCAATATTATGGCTGTTATAACAACAACAAGGAGGACTGAATGTTTCGGTCGTGCAACACTGCCAACATGCAAGTACTGGCTAGCTGGGAGATGTAACAGAAATCCTTGCAGGTTTTCACATACCTTACCAACATCTCCTTCCAATGTATACTATAATCCCTACACCACTTATAACCATTCCAAGAAGCCAACAACATGCACACCAAAGCCCGTTCTGAAGCCTGCAAATCATGCACCAAAGGCTCTTGTGTCTCTTGAGAAGCCAACCAAGTGCCAAGCAGAGGCTATGTCTGTTGAGAAGCCAATCAAGTGTGAATCAGAGGCTTTGTCTGCTGAGAAGCTTATTGAGTGTGGACCAAAGGTTATGTCTGTTGAGAAGGCAACCAAGTGTGAACAAAAGTCTTCATTGATGGAAAAGACTATCAATGTGGAAGATGTGGCTGCTAACCTATAG 741 0.4602 MVVLSDWIDLAQAYTPFPAGNILFWTRPKAQNLAAQYFGGYLEAKMLRGNSYGILSIMHNDNSSASMHTTKVALPAPPVHSSDEALHRFRRGDSGANIMAVITTTRRTECFGRATLPTCKYWLAGRCNRNPCRFSHTLPTSPSNVYYNPYTTYNHSKKPTTCTPKPVLKPANHAPKALVSLEKPTKCQAEAMSVEKPIKCESEALSAEKLIECGPKVMSVEKATKCEQKSSLMEKTINVEDVAANL 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc241672g00029 246 ProSiteProfiles Zinc finger C3H1-type profile. 113 139 IPR000571 GO:0046872
Stsc241672g00029 246 SMART c3hfinal6 114 138 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc241672g00029 Stsc-Chr241672 198733 200220 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Stsc241672g00029 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc241672g00029 - K18753 aip:107624831 162.155