Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc241672g00022 | ATGGCCTTAATCCTGCATGCAGGTAAAACAAACAAGAATGCTTACAAGGCACTCATTGCAGCTGAGTATGCTGGTGTGCAGGTTCAGTTGGCCCCCAATTTTGAGATGGGTGTCTCTAATAAAACCCCTGAATTTCTCAAGATGAATCCTATTGGAAAGGTTCCTGTGTTAGAGACACCTGAGGGTCCTGTATTTGAGAGCAATGCAATTGCTCGATATGTTGCTAGGGTAAAGGGTGACAACACTCTGTATGGCTCTTCCTCTATCGATTATGGCCATGTCGAGCAATGGATTGATTTTTCGACATTGGAGATTGATGCTAATATTGCCAGGTGGCTCTACCCAAGAAAGGGATTTGCACCTTATCTTCCCCCGGCTGAGGAGGCTGCAATTTCTGCACTTAAGAGAGCTTTGGGTGCTTTGAACACTCATCTTGCCAATAATACTTACCTGGTTGGAGATGCTGTGACCCTGGCTGACATCATAGCCACATGCAACTTGTATTTGGGTTTCACTAATATCTTGGTCAAGAGCTTCACCGCAGAGTTTCCTCATGTCGAGAGATACTTTTGGACCTTGGTTAATCAGCCAAACTTCCGAAAGATAATCGGTCAAGTGAAGCAGGTAGATGCTGTCCCACCTGTTCAATCTACAAAGAAACCTGCTCAGCCAAAAGAATCTAAGCCCAAGGCTGAGCCAAAGAAAGAAGCAAAGAAAGAGCCAGAAAAGCCCAAACCAGAAGCAGAAGAGGAGGAAGAGGCTCCCAAGCCGAAAGCCAAGAATCCTCTTGATCTTCTTCCACCAAGTAAAATGATATTGGATGAATGGAAAAGGCTCTATTCGAACACCAAAACCAATTTCCGTGAGGTTGCAATCAAAGGATTTTGGGACATGTATGATCCGGAGGGTTATTCTCTGTGGTTCTGTGATTACAAATACAATGAGGAGAACACTGTATCGTTTGTGACAATGAACAAGGTTGGCGGTTTTCTTCAGCGGATGGATTTGGCCCGTAAGTATGCATTCGGAAAGATGCTTGTGATTGGATCCCAGCCACCATTCAAGGTGAAGGGGTTGTGGCTTTTCCGTGGGCCAGAAATCCCAAAGTTCGTGTTGGATGAATGCTACGACATGGAGCTTTATGAGTGGACTAAGGTTGACATATCTGATGAAAATCAAAAGGAACGCGTCAATCAGATGATTGAAGATTACGAGCCATTTGAGGGAGAGCCTCTTTTGGATGCCAAGTGCTTTAAGTAA | 1260 | 0.446 | MALILHAGKTNKNAYKALIAAEYAGVQVQLAPNFEMGVSNKTPEFLKMNPIGKVPVLETPEGPVFESNAIARYVARVKGDNTLYGSSSIDYGHVEQWIDFSTLEIDANIARWLYPRKGFAPYLPPAEEAAISALKRALGALNTHLANNTYLVGDAVTLADIIATCNLYLGFTNILVKSFTAEFPHVERYFWTLVNQPNFRKIIGQVKQVDAVPPVQSTKKPAQPKESKPKAEPKKEAKKEPEKPKPEAEEEEEAPKPKAKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNEENTVSFVTMNKVGGFLQRMDLARKYAFGKMLVIGSQPPFKVKGLWLFRGPEIPKFVLDECYDMELYEWTKVDISDENQKERVNQMIEDYEPFEGEPLLDAKCFK | 419 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc241672g00022 | 419 | Pfam | Elongation factor 1 gamma, conserved domain | 258 | 365 | IPR001662 | GO:0003746|GO:0006414 | |
Stsc241672g00022 | 419 | Pfam | Glutathione S-transferase, N-terminal domain | 2 | 76 | IPR004045 | - | |
Stsc241672g00022 | 419 | SUPERFAMILY | GST C-terminal domain-like | 73 | 212 | IPR036282 | - | |
Stsc241672g00022 | 419 | SUPERFAMILY | Thioredoxin-like | 2 | 85 | IPR036249 | - | |
Stsc241672g00022 | 419 | SMART | EF1G_2 | 258 | 366 | IPR001662 | GO:0003746|GO:0006414 | |
Stsc241672g00022 | 419 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 82 | IPR004045 | - | |
Stsc241672g00022 | 419 | Gene3D | Translation elongation factor EF1B, gamma chain, conserved domain | 259 | 419 | IPR036433 | GO:0003746|GO:0006414 | |
Stsc241672g00022 | 419 | CDD | GST_C_EF1Bgamma_like | 90 | 210 | - | - | |
Stsc241672g00022 | 419 | MobiDBLite | consensus disorder prediction | 213 | 266 | - | - | |
Stsc241672g00022 | 419 | SUPERFAMILY | eEF1-gamma domain | 260 | 419 | IPR036433 | GO:0003746|GO:0006414 | |
Stsc241672g00022 | 419 | SFLD | Glutathione Transferase (cytosolic) | 5 | 190 | IPR040079 | - | |
Stsc241672g00022 | 419 | FunFam | Elongation factor 1 gamma | 80 | 216 | - | - | |
Stsc241672g00022 | 419 | PANTHER | ELONGATION FACTOR 1-GAMMA 1-RELATED | 1 | 419 | IPR044628 | GO:0004364 | |
Stsc241672g00022 | 419 | SFLD | Main (cytGST) | 5 | 190 | - | - | |
Stsc241672g00022 | 419 | FunFam | Elongation factor 1-gamma 1 | 259 | 419 | - | - | |
Stsc241672g00022 | 419 | Gene3D | Glutaredoxin | 1 | 74 | - | - | |
Stsc241672g00022 | 419 | Pfam | Glutathione S-transferase, C-terminal domain | 128 | 197 | IPR004046 | - | |
Stsc241672g00022 | 419 | CDD | GST_N_EF1Bgamma | 5 | 76 | - | - | |
Stsc241672g00022 | 419 | Gene3D | - | 80 | 215 | - | - | |
Stsc241672g00022 | 419 | FunFam | Elongation factor 1B gamma | 1 | 74 | - | - | |
Stsc241672g00022 | 419 | ProSiteProfiles | Elongation factor 1 (EF-1) gamma C-terminal domain profile. | 259 | 419 | IPR001662 | GO:0003746|GO:0006414 | |
Stsc241672g00022 | 419 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 87 | 215 | IPR010987 | - | |
Stsc241672g00022 | 419 | MobiDBLite | consensus disorder prediction | 223 | 259 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc241672g00022 | Stsc-Chr241672 | 150141 | 152915 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc241672g00022 | 1 | 419 | Eukaryotic Initiation Factors Gene Family | AT1G57720 | 75.418 | 0.0 | 635 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc241672g00022 | K03233 | - | gmx:547637 | 705.286 |